RNA–Protein interactions for RNA: ENST00000318438.6

SYCN-201, Transcript of syncollin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCN, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCN-201ENST00000318438 VSTM2BA6NLU5 285 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 PRMT5O14744 637 aaPredicted RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 AVILO75366 819 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 CTAG2O75638 210 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 WFS1O76024 890 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 BMP10O95393 424 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 TSPAN12O95859 305 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 ONECUT2O95948 504 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 HOXD4P09016 255 aaPredicted RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 FDXRP22570 491 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 ARNTP27540 789 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 DGKQP52824 942 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 TERF1P54274 439 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 GNG11P61952 73 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 ALDH6A1Q02252 535 aaKnown RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 BOP1Q14137 746 aaKnown RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 SYTL3Q4VX76 610 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 ATG9BQ674R7 924 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 KIAA0930Q6ICG6 404 aaPredicted RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 NDUFAF7Q7L592 441 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 CAND1Q86VP6 1230 aaKnown RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 CHERPQ8IWX8 916 aaKnown RBP12.53□□□□□ -0.4
SYCN-201ENST00000318438 MARVELD2Q8N4S9 558 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 SLCO2A1Q92959 643 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 SERPINB12Q96P63 405 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 TRIM51Q9BSJ1 452 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 CARD6Q9BX69 1037 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 HES7Q9BYE0 225 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 CHRNA10Q9GZZ6 450 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 RNF32Q9H0A6 362 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 SPHK1Q9NYA1 384 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 EURLQ9NYK6 297 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 LRFN1Q9P244 771 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 C3orf18Q9UK00 162 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 ICKQ9UPZ9 632 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 MAU2Q9Y6X3 613 aa12.53□□□□□ -0.4
SYCN-201ENST00000318438 A0A0J9YY10 115 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 DSCR3O14972 297 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 VAPBO95292 243 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 MYBL2P10244 700 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 ITGAMP11215 1152 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 PAMP19021 973 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 MCM3P25205 808 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 ACADLP28330 430 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 MAGEA3P43357 314 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 CARSP49589 748 aaKnown RBP12.52□□□□□ -0.41
SYCN-201ENST00000318438 RAB28P51157 221 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 ARSFP54793 590 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 EEF1A2Q05639 463 aaKnown RBP12.52□□□□□ -0.41
SYCN-201ENST00000318438 ZNF33BQ06732 778 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 PPP1R7Q15435 360 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.41
SYCN-201ENST00000318438 ABHD17BQ5VST6 288 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 MRNIPQ6NTE8 343 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 CNSTQ6PJW8 725 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 NEK10Q6ZWH5 1172 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 FGD2Q7Z6J4 655 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 LDB1Q86U70 411 aaPredicted RBP12.52□□□□□ -0.41
SYCN-201ENST00000318438 LRRC6Q86X45 466 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 LILRB4Q8NHJ6 448 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 FLVCR1-AS1Q8TAF5 88 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 ASZ1Q8WWH4 475 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 RMND5BQ96G75 393 aaPredicted RBP12.52□□□□□ -0.41
SYCN-201ENST00000318438 NAPGQ99747 312 aaPredicted RBP12.52□□□□□ -0.41
SYCN-201ENST00000318438 P2RY12Q9H244 342 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 KLHL1Q9NR64 748 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 CUTCQ9NTM9 273 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 SAMD15Q9P1V8 674 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 PCYOX1Q9UHG3 505 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 GNPTGQ9UJJ9 305 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 KLHL20Q9Y2M5 609 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 HCFC1P51610 2035 aa12.52□□□□□ -0.41
SYCN-201ENST00000318438 FAM237BA0A1B0GVD1 139 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 MAGEB16A2A368 324 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 SDR42E2A6NKP2 422 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 PRRG2O14669 202 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 PFDN6O15212 129 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 ASNA1O43681 348 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 NDUFS3O75489 264 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 MLYCDO95822 493 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 LY6G6DO95868 133 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 OGNP20774 298 aaKnown RBP12.51□□□□□ -0.41
SYCN-201ENST00000318438 RPS3P23396 243 aaKnown RBP eCLIP12.51□□□□□ -0.41
SYCN-201ENST00000318438 CCR7P32248 378 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 ST13P50502 369 aaKnown RBP12.51□□□□□ -0.41
SYCN-201ENST00000318438 PTK6Q13882 451 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 BRD3Q15059 726 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 TYSND1Q2T9J0 566 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 CASC4Q6P4E1 433 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 CES3Q6UWW8 571 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 UNC5AQ6ZN44 842 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 SIAH3Q8IW03 269 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 PPIL6Q8IXY8 311 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 TBC1D21Q8IYX1 336 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 SLC22A15Q8IZD6 547 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 OTUD6BQ8N6M0 293 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 NAT8LQ8N9F0 302 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 OR5K2Q8NHB8 316 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 STT3BQ8TCJ2 826 aa12.51□□□□□ -0.41
SYCN-201ENST00000318438 LKAAEAR1Q8TD35 194 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms