RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 ZNF77Q15935 545 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 SLC5A9Q2M3M2 681 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 OR4K1Q8NGD4 311 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 METTL21AQ8WXB1 218 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 JPH3Q8WXH2 748 aaPredicted RBP13.24□□□□□ -0.29
DDX54-202ENST00000314045 DPYSL5Q9BPU6 564 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 TPT1P8Q9HAU6 139 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 AIG1Q9NVV5 245 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 FZD4Q9ULV1 537 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 LYVE1Q9Y5Y7 322 aa13.24□□□□□ -0.29
DDX54-202ENST00000314045 UGT2B17O75795 530 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 RSL1D1O76021 490 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 JUNDP17535 347 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ITPKBP27987 946 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ABHD13Q7L211 337 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 DEPDC4Q8N2C3 294 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 SETD7Q8WTS6 366 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 TRAPPC9Q96Q05 1148 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 DPH7Q9BTV6 452 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 IRAK3Q9Y616 596 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 OR5K4A6NMS3 321 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 TNFRSF11BO00300 401 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 C1SP09871 688 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 AVPR1BP47901 424 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ELOCQ15369 112 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ZFAND4Q86XD8 727 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ARL10Q8N8L6 244 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 OR52L1Q8NGH7 329 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 POLR1BQ9H9Y6 1135 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 PNPLA3Q9NST1 481 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 CALML5Q9NZT1 146 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 SPATA7Q9P0W8 599 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 STOX2Q9P2F5 926 aaPredicted RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 ATXN10Q9UBB4 475 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 INTS6Q9UL03 887 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 PENKP01210 267 aaPredicted RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 RAP2AP10114 183 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 MYL12AP19105 171 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 CCR2P41597 374 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 CLK3P49761 638 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 BIKQ13323 160 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ANKRD26P1Q6NSI1 321 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 UNC5DQ6UXZ4 953 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 PLEKHM3Q6ZWE6 761 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 GALNT5Q7Z7M9 940 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 FBXL8Q96CD0 374 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 VMP1Q96GC9 406 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ATOH8Q96SQ7 321 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 SMAD5Q99717 465 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 DGCR6LQ9BY27 220 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 C8orf4Q9NR00 106 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 GPN3Q9UHW5 284 aaPredicted RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 ASGR2P07307 311 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 OXTRP30559 389 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 RPS9P46781 194 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 DGCR6Q14129 220 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 ADGRE1Q14246 886 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 IFI44LQ53G44 452 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 DEPDC1Q5TB30 811 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 BHLHA9Q7RTU4 235 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 FAM20CQ8IXL6 584 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 RASSF5Q8WWW0 418 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 SORT1Q99523 831 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 PKP4Q99569 1192 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 YIPF4Q9BSR8 244 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 APOBEC3BQ9UH17 382 aaKnown RBP13.23□□□□□ -0.29
DDX54-202ENST00000314045 UTS2RQ9UKP6 389 aa13.23□□□□□ -0.29
DDX54-202ENST00000314045 HTRA2O43464 458 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 NUAK1O60285 661 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 HSD3B1P14060 373 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 HSD3B2P26439 372 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 PXNP49023 591 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 RAB28P51157 221 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 ABHD18Q0P651 414 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 RPA4Q13156 261 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 LETMD1Q6P1Q0 360 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 WDR48Q8TAF3 677 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 UBXN10Q96LJ8 280 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 NELL2Q99435 816 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 KLHL42Q9P2K6 505 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 GTF2A1LQ9UNN4 478 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 TESMINQ9Y4I5 508 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 PPP6CO00743 305 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 CAPN5O15484 640 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 FGF4P08620 206 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 THEGLP0DJG4 465 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 CKMT2P17540 419 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 RYKP34925 604 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 MTAPQ13126 283 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 TOP3AQ13472 1001 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 NAIF1Q69YI7 327 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 CHFRQ96EP1 664 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 GTPBP2Q9BX10 602 aaKnown RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 PRSS16Q9NQE7 514 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 SMPD3Q9NY59 655 aaPredicted RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 MRTO4Q9UKD2 239 aaKnown RBP13.22□□□□□ -0.29
DDX54-202ENST00000314045 TRIOBPQ9H2D6 2365 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 TMEM150CB9EJG8 249 aa13.22□□□□□ -0.29
DDX54-202ENST00000314045 ADAMDEC1O15204 470 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms