RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 APBB3O95704 486 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 SEMA4FO95754 770 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 BAG2O95816 211 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 PCNAP12004 261 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 DGKEP52429 567 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 MRPS22P82650 360 aaKnown RBP11.44□□□□□ -0.58
TRIM40-205ENST00000307859 ACSM2AQ08AH3 577 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 CLCA4Q14CN2 919 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 FXNQ16595 210 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 HIST2H2ACQ16777 129 aaPredicted RBP11.44□□□□□ -0.58
TRIM40-205ENST00000307859 UAP1L1Q3KQV9 507 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 SPIN4Q56A73 249 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 RABL3Q5HYI8 236 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 THEMIS2Q5TEJ8 643 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 ACSM2BQ68CK6 577 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 HIST2H2AA3Q6FI13 130 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 NANOGP8Q6NSW7 305 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 GCNT7Q6ZNI0 430 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 MSANTD1Q6ZTZ1 278 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 SYT13Q7L8C5 426 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 FAM129CQ86XR2 697 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 DNAJB8Q8NHS0 232 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 DNAJB14Q8TBM8 379 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 CHTF18Q8WVB6 975 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 OR1E3Q8WZA6 343 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 UBE2E3Q969T4 207 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 ZUFSPQ96AP4 578 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 DUS3LQ96G46 650 aaKnown RBP11.44□□□□□ -0.58
TRIM40-205ENST00000307859 PDXPQ96GD0 296 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 WDR92Q96MX6 357 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 TSSK3Q96PN8 268 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 FERD3LQ96RJ6 166 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 CGREF1Q99674 301 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 RAB11FIP5Q9BXF6 653 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 SPNS1Q9H2V7 528 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 MUC13Q9H3R2 512 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 MVB12BQ9H7P6 319 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 NANOGQ9H9S0 305 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 PELI2Q9HAT8 420 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 WASH6PQ9NQA3 447 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 DMRT3Q9NQL9 472 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 NMRK1Q9NWW6 199 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 SIRT5Q9NXA8 310 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 GMPR2Q9P2T1 348 aaKnown RBP11.44□□□□□ -0.58
TRIM40-205ENST00000307859 MAN2B2Q9Y2E5 1009 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 LRRC42Q9Y546 428 aa11.44□□□□□ -0.58
TRIM40-205ENST00000307859 TP53BP1Q12888 1972 aaPredicted RBP11.44□□□□□ -0.58
TRIM40-205ENST00000307859 PRSS51A0A1B0GVH4 220 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 H0Y8X5 98 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 TOR1BO14657 336 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 TNFRSF10CO14798 259 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 CASQ2O14958 399 aaPredicted RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 NVLO15381 856 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 DNAJA2O60884 412 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 CDH1P12830 882 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 PRPS1L1P21108 318 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 PKLRP30613 574 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 AKT2P31751 481 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 PIK3CBP42338 1070 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 GSK3BP49841 420 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 HNRNPFP52597 415 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 RPS13P62277 151 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 YPEL5P62699 121 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 PHC1P78364 1004 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 RAE1P78406 368 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 RHDQ02161 417 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 MTAPQ13126 283 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 MAPKAPK3Q16644 382 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 DPY19L1Q2PZI1 675 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 TPRG1LQ5T0D9 272 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 IRAK1BP1Q5VVH5 260 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 LCN8Q6JVE9 175 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 GALNT18Q6P9A2 607 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 WASH2PQ6VEQ5 465 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 ZNF852Q6ZMS4 543 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 SPATA24Q86W54 205 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 C17orf64Q86WR6 236 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 DHFR2Q86XF0 187 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 PTRH1Q86Y79 214 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 SYNPOQ8N3V7 929 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 RAB42Q8N4Z0 105 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 TMEM145Q8NBT3 493 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 FLCNQ8NFG4 579 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 ABHD11Q8NFV4 315 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 OR8J3Q8NGG0 315 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 COL26A1Q96A83 441 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 RSRC1Q96IZ7 334 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 EGLN2Q96KS0 407 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 CAMK1GQ96NX5 476 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 OR52E6Q96RD3 313 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 EBPLQ9BY08 206 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 ALG2Q9H553 416 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 CARS2Q9HA77 564 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 C6orf203Q9P0P8 240 aaPredicted RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 TAC3Q9UHF0 121 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 MOSPD1Q9UJG1 213 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 CA5BQ9Y2D0 317 aa11.43□□□□□ -0.58
TRIM40-205ENST00000307859 TDRD6O60522 2096 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 MAP1BP46821 2468 aaKnown RBP11.43□□□□□ -0.58
TRIM40-205ENST00000307859 CHD6Q8TD26 2715 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms