RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 ZC3HC1Q86WB0 502 aaKnown RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 C1orf52Q8N6N3 182 aaKnown RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 OR4E2Q8NGC2 313 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SLC25A44Q96H78 314 aaPredicted RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 ARHGAP9Q9BRR9 750 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 CD163L1Q9NR16 1453 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 COPS7AQ9UBW8 275 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 CITO14578 2027 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ADAMDEC1O15204 470 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 MMP8P22894 467 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 MAGEA3P43357 314 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 WDR4P57081 412 aaKnown RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 RAB8AP61006 207 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 C18orf21Q32NC0 220 aaPredicted RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 POTEHQ6S545 545 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ARSKQ6UWY0 536 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ZDHHC1Q8WTX9 485 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 OR51B5Q9H339 312 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 NUDT4Q9NZJ9 180 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 UTS2RQ9UKP6 389 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SH2B3Q9UQQ2 575 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SPATA31C2B4DYI2 1134 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ABLIM1O14639 778 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 IL33O95760 270 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 GBX2P52951 348 aaPredicted RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 ERVK-21P61565 698 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SOWAHAQ2M3V2 549 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 WASH2PQ6VEQ5 465 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 RIOX2Q8IUF8 465 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 CLDN19Q8N6F1 224 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.31□□□□□ -0.44
USP38-201ENST00000307017 PADI3Q9ULW8 664 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 BTNL10A8MVZ5 291 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 ARVCFO00192 962 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 CLIC1O00299 241 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 RENP00797 406 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 MAGEA8P43361 318 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 LEPRP48357 1165 aaKnown RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 SLC9A3P48764 834 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 CRYBB1P53674 252 aaPredicted RBP12.31□□□□□ -0.44
USP38-201ENST00000307017 JAM2P57087 298 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SQSTM1Q13501 440 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SLC39A4Q6P5W5 647 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 RNF130Q86XS8 419 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 RFKQ969G6 155 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 HIST1H2AAQ96QV6 131 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 TMEM246Q9BRR3 403 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 SLC5A7Q9GZV3 580 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 B3GALT1Q9Y5Z6 326 aa12.31□□□□□ -0.44
USP38-201ENST00000307017 LOC730098B7Z3J9 87 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 TEX46H3BTG2 121 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 APODP05090 189 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 G6PDP11413 515 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 CDH1P12830 882 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 RPS13P62277 151 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 RPS26P62854 115 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 PITPNAQ00169 270 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 PLGLB1Q02325 96 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 GTF2IRD2BQ6EKJ0 949 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 GTF2IRD2Q86UP8 949 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 C7orf61Q8IZ16 206 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 OXR1Q8N573 874 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 WDR6Q9NNW5 1121 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 PRDM9Q9NQV7 894 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 UPB1Q9UBR1 384 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 A0A1B0GVC2 190 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 FEZF1A0PJY2 475 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 A6NIN4 97 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 PIP5K1CO60331 668 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 ZNF14P17017 642 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 STOMP27105 288 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 GATMP50440 423 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 CDH4P55283 916 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 DCAKDQ8WVC6 231 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 RIOK2Q9BVS4 552 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 MSRAQ9UJ68 235 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 YY2O15391 372 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 UBXN2BQ14CS0 331 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 FIGNL1Q6PIW4 674 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 PLD6Q8N2A8 252 aaKnown RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 C7orf26Q96N11 449 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 ITPAQ9BY32 194 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 ZNF701Q9NV72 531 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 SLC39A1Q9NY26 324 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 DTLQ9NZJ0 730 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 H0YJX3 145 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 GCATO75600 419 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 MLLT3P42568 568 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 PRKD1Q15139 912 aaPredicted RBP12.3□□□□□ -0.44
USP38-201ENST00000307017 CHRNA6Q15825 494 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 CEACAM20Q6UY09 585 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 LYSMD3Q7Z3D4 306 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 MON1AQ86VX9 555 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 IGDCC3Q8IVU1 814 aa12.3□□□□□ -0.44
USP38-201ENST00000307017 SLITRK4Q8IW52 837 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms