RNA–Protein interactions for RNA: ENST00000303450.4

HOXC9-201, Transcript of homeobox C9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC9, Length 1,516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-201ENST00000303450 SRPX2O60687 465 aaPredicted RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 ZWINTO95229 277 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 DNAJB13P59910 316 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 DOC2AQ14183 400 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 PCLAFQ15004 111 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 UNC50Q53HI1 259 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 FRMPD2BQ6IN97 320 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 IGF2-ASQ6U949 168 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 C10orf107Q8IVU9 208 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 GPR135Q8IZ08 494 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 CCNYL1Q8N7R7 359 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 ZNF483Q8TF39 744 aaPredicted RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 RERGQ96A58 199 aaPredicted RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 PTCD3Q96EY7 689 aaKnown RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 NSUN5Q96P11 429 aaKnown RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 TEFMQ96QE5 360 aaKnown RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 SEMA4BQ9NPR2 832 aaPredicted RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 PCDHGA3Q9Y5H0 932 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 B3GALT1Q9Y5Z6 326 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 OR1F1O43749 312 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 BRINP1O60477 761 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 OR2B3O76000 313 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 ARL1P40616 181 aaPredicted RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 ETV4P43268 484 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 CCNG1P51959 295 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 CDH13P55290 713 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 VSX2P58304 361 aaPredicted RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 REEP5Q00765 189 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 SLBPQ14493 270 aaKnown RBP eCLIP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 TBCCQ15814 346 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 LARP7Q4G0J3 582 aaKnown RBP eCLIP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 TTMPQ5BVD1 217 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 LIPMQ5VYY2 423 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 RPS27LQ71UM5 84 aaKnown RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 KRT78Q8N1N4 520 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 OR2A5Q96R48 311 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 EFCAB11Q9BUY7 163 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 SPNS1Q9H2V7 528 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 ACTR8Q9H981 624 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 ACSS2Q9NR19 701 aa23.43■■□□□ 1.34
HOXC9-201ENST00000303450 GEMIN8Q9NWZ8 242 aaKnown RBP23.43■■□□□ 1.34
HOXC9-201ENST00000303450 LOC105369274A0A096LPK9 316 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 LOC102723532A0A0G2JNH3 316 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 TRBC2A0A5B9 178 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 TMEM120BA0PK00 339 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 C9orf172C9J069 976 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 H0YGG7 62 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 PRAMEF4O60810 478 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 DXOO77932 396 aaKnown RBP23.42■■□□□ 1.34
HOXC9-201ENST00000303450 EIF2S1P05198 315 aaKnown RBP23.42■■□□□ 1.34
HOXC9-201ENST00000303450 NAGLUP54802 743 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 ARF3P61204 181 aaPredicted RBP23.42■■□□□ 1.34
HOXC9-201ENST00000303450 PCDH1Q08174 1060 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 ASPHQ12797 758 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 LAPTM5Q13571 262 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 MPP2Q14168 576 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 RBBP7Q16576 425 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 PAGE2BQ5JRK9 111 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 TCTE1Q5JU00 501 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 CFAP157Q5JU67 520 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 PRAMEF9Q5VWM5 478 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 OR4N4Q8N0Y3 316 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 ZNF740Q8NDX6 193 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 SREK1Q8WXA9 508 aaKnown RBP23.42■■□□□ 1.34
HOXC9-201ENST00000303450 THAP11Q96EK4 314 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 MOCOSQ96EN8 888 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 WDR34Q96EX3 536 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 SARGQ9BW04 601 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 B3GNT4Q9C0J1 378 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 SPRTNQ9H040 489 aaPredicted RBP23.42■■□□□ 1.34
HOXC9-201ENST00000303450 ZBTB26Q9HCK0 441 aa23.42■■□□□ 1.34
HOXC9-201ENST00000303450 KCNE1BA0A087WTH5 132 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 HMGB1P1B2RPK0 211 aaPredicted RBP23.41■■□□□ 1.34
HOXC9-201ENST00000303450 NVLO15381 856 aaKnown RBP23.41■■□□□ 1.34
HOXC9-201ENST00000303450 LCMT2O60294 686 aaKnown RBP23.41■■□□□ 1.34
HOXC9-201ENST00000303450 TRIM13O60858 407 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 WFS1O76024 890 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 CTSBP07858 339 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 ALDH3A1P30838 453 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 BCL6P41182 706 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 CASP2P42575 452 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 CLCQ05315 142 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 RBBP5Q15291 538 aaKnown RBP23.41■■□□□ 1.34
HOXC9-201ENST00000303450 HIST2H2ACQ16777 129 aaPredicted RBP23.41■■□□□ 1.34
HOXC9-201ENST00000303450 HIST2H2AA3Q6FI13 130 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 PWWP2BQ6NUJ5 590 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 MYLK4Q86YV6 388 aaPredicted RBP23.41■■□□□ 1.34
HOXC9-201ENST00000303450 TMEM126BQ8IUX1 230 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 ANKRD42Q8N9B4 389 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 MFSD9Q8NBP5 474 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 MECRQ9BV79 373 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 THSD1Q9NS62 852 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 PCDHGA7Q9Y5G6 932 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 PCDHGA4Q9Y5G9 962 aa23.41■■□□□ 1.34
HOXC9-201ENST00000303450 OR7A17O14581 309 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 TSPAN8P19075 237 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 SLC5A2P31639 672 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 NAA20P61599 178 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 WASHC2DQ5SRD0 308 aa23.4■■□□□ 1.34
HOXC9-201ENST00000303450 TMIGD1Q6UXZ0 262 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms