RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 KLF1Q13351 362 aaPredicted RBP10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GPR157Q5UAW9 335 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ZFPM1Q8IX07 1006 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 SHKBP1Q8TBC3 707 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 AUTS2Q8WXX7 1259 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 SLC35A5Q9BS91 424 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 DCSTAMPQ9H295 470 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 TDP1Q9NUW8 608 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 GMEB2Q9UKD1 530 aa10.13□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF705EA8MWA4 302 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 M0R233 179 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 AHSA1O95433 338 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 JUNP05412 331 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 H1F0P07305 194 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CHMP24386 653 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BMP8BP34820 402 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 RBM39Q14498 530 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF267Q14586 743 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 TSTQ16762 297 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BMP8AQ7Z5Y6 402 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 OR5T1Q8NG75 326 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 PEX13Q92968 403 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CMKLR1Q99788 373 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BEX2Q9BXY8 128 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 KATNBL1Q9H079 304 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 SLC25A51Q9H1U9 297 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BEX1Q9HBH7 125 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ASTN1O14525 1302 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 AGAP5A6NIR3 686 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CDC7O00311 574 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 SNAPC5O75971 98 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 KLK3P07288 261 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 GP1BBP13224 206 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 DHPSP49366 369 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 AQP4P55087 323 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CRHR2Q13324 411 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CLCA4Q14CN2 919 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BCL2A1Q16548 175 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 UGT8Q16880 541 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 NT5DC1Q5TFE4 455 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF773Q6PK81 442 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF781Q8N8C0 355 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 MTFR1LQ9H019 292 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 Q9N2J8 555 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 FAM170BA6NMN3 283 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 FARS2O95363 451 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 IFNGR1P15260 489 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ERP29P30040 261 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BDH1Q02338 343 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 HSD17B12Q53GQ0 312 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 TSTD2Q5T7W7 516 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ENPP7Q6UWV6 458 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ESAMQ96AP7 390 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 RBP7Q96R05 134 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ITPAQ9BY32 194 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CERS4Q9HA82 394 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF701Q9NV72 531 aaPredicted RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 POFUT2Q9Y2G5 429 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 DERAQ9Y315 318 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BACE2Q9Y5Z0 518 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 SPATA31A1Q5TZJ5 1347 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 A0A1W2PPL8 197 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 BLOC1S5-TXNDC5H3BN57 136 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 WNT10BO00744 389 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 ATP6V1G1O75348 118 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CDRT1O95170 752 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 RAB4AP20338 218 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 HTR7P34969 479 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 NRLP54845 237 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 VGLL4Q14135 290 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 DECR1Q16698 335 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 C12orf40Q86WS4 652 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 OR56B2PQ8NGI1 322 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 OR14K1Q8NGZ2 314 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 RGMAQ96B86 450 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 DEFB118Q96PH6 123 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 MAGEH1Q9H213 219 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 CARS2Q9HA77 564 aaKnown RBP10.12□□□□□ -0.79
CLIP1-201ENST00000302528 LAMP5Q9UJQ1 280 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 HSPB11Q9Y547 144 aa10.12□□□□□ -0.79
CLIP1-201ENST00000302528 TULP2O00295 520 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 VILLO15195 856 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 H6PDO95479 791 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 CH25HO95992 272 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GLDCP23378 1020 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NDUFS1P28331 727 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ADGRE1Q14246 886 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 QPCTQ16769 361 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 VSIG10LQ86VR7 867 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ZNF283Q8N7M2 679 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GEMIN6Q8WXD5 167 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GIMAP5Q96F15 307 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 DDX4Q9NQI0 724 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 ENAMQ9NRM1 1142 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 FZD4Q9ULV1 537 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 SHOX2O60902 331 aaPredicted RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 GRIA2P42262 883 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 NR0B1P51843 470 aaKnown RBP10.11□□□□□ -0.79
CLIP1-201ENST00000302528 DGKEP52429 567 aa10.11□□□□□ -0.79
CLIP1-201ENST00000302528 TMBIM6P55061 237 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms