RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 RD3Q7Z3Z2 195 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 PTRH1Q86Y79 214 aaKnown RBP21.44■■□□□ 1.02
SMAD1-201ENST00000302085 SPPL2CQ8IUH8 684 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 ABHD11Q8NFV4 315 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 OR7A2PQ8NGA2 310 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 INPP5KQ9BT40 448 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 PAIP1Q9H074 479 aaKnown RBP21.44■■□□□ 1.02
SMAD1-201ENST00000302085 KCNH6Q9H252 994 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 OR51B5Q9H339 312 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 PIF1Q9H611 641 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 MVB12BQ9H7P6 319 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 COPS7BQ9H9Q2 264 aaPredicted RBP21.44■■□□□ 1.02
SMAD1-201ENST00000302085 LMAN1LQ9HAT1 526 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 WASH6PQ9NQA3 447 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 MAN2B2Q9Y2E5 1009 aa21.44■■□□□ 1.02
SMAD1-201ENST00000302085 EYSQ5T1H1 3165 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 TRBV5-3A0A0A0MS03 114 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 ARPC2O15144 300 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 STAMBPO95630 424 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 ANXA4P09525 319 aaPredicted RBP21.43■■□□□ 1.02
SMAD1-201ENST00000302085 AKT2P31751 481 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 GRIA3P42263 894 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 C21orf58P58505 322 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 MTAPQ13126 283 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 KRT33BQ14525 404 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 RUNDC3AQ59EK9 446 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 LCN8Q6JVE9 175 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 ARMCX6Q7L4S7 300 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 KRT78Q8N1N4 520 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 PKP2Q99959 881 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 SIRT5Q9NXA8 310 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 TBC1D29Q9UFV1 150 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 AP4S1Q9Y587 144 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 HS3ST3A1Q9Y663 406 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 EML2O95834 649 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 IGHV4-34P06331 123 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 AK4P27144 223 aaPredicted RBP21.43■■□□□ 1.02
SMAD1-201ENST00000302085 HTR1BP28222 390 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 PKLRP30613 574 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 RAB28P51157 221 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 OR4D2P58180 307 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 TRIP10Q15642 601 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 LRRC36Q1X8D7 754 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 GTDC1Q4AE62 458 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 OR4F3Q6IEY1 312 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 PTCRAQ6ISU1 281 aaPredicted RBP21.43■■□□□ 1.02
SMAD1-201ENST00000302085 GALNT18Q6P9A2 607 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 SYT13Q7L8C5 426 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 ANKRD46Q86W74 232 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 RAB42Q8N4Z0 105 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 TMEM145Q8NBT3 493 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 ITCHQ96J02 903 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 RIMS3Q9UJD0 308 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 CYP8B1Q9UNU6 501 aa21.43■■□□□ 1.02
SMAD1-201ENST00000302085 AQP12BA6NM10 295 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 CHURC1-FNTBB4DL54 471 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 SAP18O00422 153 aaKnown RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 MTHFD1P11586 935 aaKnown RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 PEX2P28328 305 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 HTR1EP28566 365 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 SLC7A1P30825 629 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 TIA1P31483 386 aaKnown RBP eCLIP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 SOX11P35716 441 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 RBBP5Q15291 538 aaKnown RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 TCEA2Q15560 299 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 FXNQ16595 210 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 LEXMQ3ZCV2 418 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 LRIF1Q5T3J3 769 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 ANO7Q6IWH7 933 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 TLDC1Q6P9B6 456 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 DNAJC14Q6Y2X3 702 aaPredicted RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 AQP12AQ8IXF9 295 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 OR52E1Q8NGJ3 308 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 OR2L8Q8NGY9 312 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 DNAJB8Q8NHS0 232 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 CCL4L1Q8NHW4 92 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 NAF1Q96HR8 494 aaKnown RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 ZNF583Q96ND8 569 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 CDX2Q99626 313 aaPredicted RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 MUC13Q9H3R2 512 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 IKZF5Q9H5V7 419 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 RMND5AQ9H871 391 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 NIPSNAP3AQ9UFN0 247 aaPredicted RBP21.42■■□□□ 1.02
SMAD1-201ENST00000302085 ICKQ9UPZ9 632 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 PCDHB14Q9Y5E9 798 aa21.42■■□□□ 1.02
SMAD1-201ENST00000302085 A0A096LPI6 279 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 H7BY64 318 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 TNFRSF10CO14798 259 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 ERN1O75460 977 aaKnown RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 RPSAP08865 295 aaKnown RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 NCK1P16333 377 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 HOXB9P17482 250 aaPredicted RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 PTPN6P29350 595 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 KIR3DL1P43629 444 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 CCR8P51685 355 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 WNT3P56703 355 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 YPEL5P62699 121 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 SRSF11Q05519 484 aaKnown RBP21.41■■□□□ 1.02
SMAD1-201ENST00000302085 ABRAXAS1Q6UWZ7 409 aa21.41■■□□□ 1.02
SMAD1-201ENST00000302085 Q6ZSR6 202 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms