RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 ACKR2O00590 384 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 PRAMEF10O60809 474 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 INSRRP14616 1297 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 CLCN4P51793 760 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 ERVPABLB-1P60509 514 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 RAD51Q06609 339 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 HSPA14Q0VDF9 509 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 FCN2Q15485 313 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 AANATQ16613 207 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 BCL2L15Q5TBC7 163 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 C22orf42Q6IC83 251 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 MSRB3Q8IXL7 192 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 OR4N4Q8N0Y3 316 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 B3GNT7Q8NFL0 401 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 MAL2Q969L2 176 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 ISG20Q96AZ6 181 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 TSPAN17Q96FV3 270 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 FEVQ99581 238 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 HTATIP2Q9BUP3 242 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 SPASTQ9UBP0 616 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 VPS9D1Q9Y2B5 631 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 FAM227AF5H4B4 570 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 GLAP06280 429 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 PEPDP12955 493 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 UBA1P22314 1058 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 CTAG1AP78358 180 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 DSC2Q02487 901 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 IL18Q14116 193 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 PAFAH1B3Q15102 231 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 TRIM71Q2Q1W2 868 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 ZC3H12BQ5HYM0 836 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 C10orf62Q5T681 223 aaPredicted RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 KANSL1Q7Z3B3 1105 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 LIX1Q8N485 282 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 WNT8BQ93098 351 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 PPP1R2P1Q96PQ5 205 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 DPY30Q9C005 99 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 KCNN2Q9H2S1 579 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 CCNB1IP1Q9NPC3 277 aa13.98□□□□□ -0.17
CDT1-201ENST00000301019 DCAF13Q9NV06 445 aaKnown RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 MAFBQ9Y5Q3 323 aaPredicted RBP13.98□□□□□ -0.17
CDT1-201ENST00000301019 TCRBV16S1A1N1A0A5B0 115 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 SEC22BO75396 215 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 RGS1Q08116 209 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 DSG2Q14126 1118 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 TTLL4Q14679 1199 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 MTFR2Q6P444 385 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 LINC00299Q6ZSB3 139 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 ZNF767PQ75MW2 155 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 OR11H4Q8NGC9 324 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 RDH12Q96NR8 316 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 ZBTB18Q99592 522 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 TCF25Q9BQ70 676 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 MUC13Q9H3R2 512 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 REEP1Q9H902 201 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 MRPL39Q9NYK5 338 aaKnown RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 PCDHGA9Q9Y5G4 932 aaKnown RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 COL1A2P08123 1366 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 UGT2B17O75795 530 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 S1PR4O95977 384 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 ARF4P18085 180 aaPredicted RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 VSX2P58304 361 aaPredicted RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 CBLBQ13191 982 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 TUSC1Q2TAM9 212 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.97□□□□□ -0.174e-6■□□□□ 10.9
CDT1-201ENST00000301019 PKDCCQ504Y2 493 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 SHEQ5VZ18 495 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 CAPN13Q6MZZ7 669 aaPredicted RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 GPRIN3Q6ZVF9 776 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 EIF3MQ7L2H7 374 aaKnown RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 GPRIN1Q7Z2K8 1008 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 PRSS42Q7Z5A4 293 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 PLCZ1Q86YW0 608 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 LHFPL5Q8TAF8 219 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 L3HYPDHQ96EM0 354 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 GPR21Q99679 349 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 C11orf84Q9BUA3 381 aaPredicted RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 ASB7Q9H672 318 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 CATSPERBQ9H7T0 1116 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 GLOD4Q9HC38 313 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 FANCFQ9NPI8 374 aa13.97□□□□□ -0.17
CDT1-201ENST00000301019 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.97□□□□□ -0.17
CDT1-201ENST00000301019 MIA3Q5JRA6 1907 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 PCDH17O14917 1159 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 RGS11O94810 467 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 CPSF4O95639 269 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 SLC2A2P11168 524 aaPredicted RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 ATF6P18850 670 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 AKT1P31749 480 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 CRYZQ08257 329 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 MAB21L1Q13394 359 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 LARS2Q15031 903 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 PROX2Q3B8N5 592 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 OVOS1Q6IE37 1185 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 TEX261Q6UWH6 196 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 CHPFQ8IZ52 775 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 OR9Q2Q8NGE9 314 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 PARK7Q99497 189 aaKnown RBP13.96□□□□□ -0.17
CDT1-201ENST00000301019 CCDC32Q9BV29 185 aa13.96□□□□□ -0.17
CDT1-201ENST00000301019 APOL5Q9BWW9 433 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms