RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 OR9Q2Q8NGE9 314 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ATL1Q8WXF7 558 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 HDAC2Q92769 488 aaKnown RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 COQ7Q99807 217 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 MS4A12Q9NXJ0 267 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 CXXC1Q9P0U4 656 aaPredicted RBP12.9□□□□□ -0.34
CASC4-201ENST00000299957 FBXW2Q9UKT8 454 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 NHSQ6T4R5 1651 aa12.9□□□□□ -0.34
CASC4-201ENST00000299957 ZNFX1Q9P2E3 1918 aaKnown RBP12.9□□□□□ -0.35
CASC4-201ENST00000299957 FADS2P1A8MWK0 482 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 FXYD1O00168 92 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SLC22A1O15245 554 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SGTAO43765 313 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 GMFGO60234 142 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 CCNDBP1O95273 360 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 FGF4P08620 206 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 RYKP34925 604 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 MAGEA12P43365 314 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 MAPK12P53778 367 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SCARB2Q14108 478 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 CRTC2Q53ET0 693 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 LDLRAD1Q5T700 205 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 CHST9Q7L1S5 443 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 FAM124AQ86V42 546 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 DCP2Q8IU60 420 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 LINC01465Q8N7H1 131 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SLC22A12Q96S37 553 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SPRTNQ9H040 489 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 CERS4Q9HA82 394 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 TAS2R16Q9NYV7 291 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 PCDHGB3Q9Y5G1 929 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 CORINQ9Y5Q5 1042 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SPIN1Q9Y657 262 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 STRCQ7RTU9 1775 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 FAM240BA0A1B0GVZ2 78 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 TRBC2A0A5B9 178 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 ZNF840PA6NDX5 716 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 GNB5O14775 395 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 INPPL1O15357 1258 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 TLX2O43763 284 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 RPLP0P05388 317 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 FPR1P21462 350 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 HTR1BP28222 390 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 MAT2AP31153 395 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 EMX1Q04741 257 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 CDK5R2Q13319 367 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 KIAA1614Q5VZ46 1190 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 CCDC149Q6ZUS6 474 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 THOC6Q86W42 341 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 ZNF420Q8TAQ5 688 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 POLR2J3Q9H1A7 115 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 IKZF5Q9H5V7 419 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 RUVBL1Q9Y265 456 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 A0A1W2PRB8 838 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 A6NL46 340 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 EOMESO95936 686 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 GALTP07902 379 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 RPS17P08708 135 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 GADD45AP24522 165 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 TALDO1P37837 337 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 IL18Q14116 193 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 VMACQ2NL98 169 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 KIAA1161Q6NSJ0 714 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 MED27Q6P2C8 311 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 PLET1Q6UQ28 207 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 CHDHQ8NE62 594 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 TBC1D15Q8TC07 691 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 SLC9A6Q92581 669 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 C8orf4Q9NR00 106 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 UCKL1Q9NWZ5 548 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 TUBA8Q9NY65 449 aaPredicted RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 RIMKLBQ9ULI2 386 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 N6AMT1Q9Y5N5 214 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 WNT6Q9Y6F9 365 aa12.89□□□□□ -0.35
CASC4-201ENST00000299957 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.89□□□□□ -0.35
CASC4-201ENST00000299957 PLK4O00444 970 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TSPAN6O43657 245 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 NME6O75414 186 aaPredicted RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 FUCA1P04066 466 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 NR2F6P10588 404 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CTSOP43234 321 aaPredicted RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 NKX3-2P78367 333 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 MC1RQ01726 317 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 MTSS1LQ765P7 747 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 DSG4Q86SJ6 1040 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 KRT73Q86Y46 540 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 YAF2Q8IY57 180 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TCEANCQ8N8B7 351 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 KCT2Q8NC54 265 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 SLC22A17Q8WUG5 538 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 MAELQ96JY0 434 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 ZNF583Q96ND8 569 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 MAF1Q9H063 256 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 BEX1Q9HBH7 125 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CSNK1G1Q9HCP0 422 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ZNF221Q9UK13 617 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 CNOT11Q9UKZ1 510 aaKnown RBP12.88□□□□□ -0.35
CASC4-201ENST00000299957 SPAG17Q6Q759 2223 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 TARM1B6A8C7 271 aa12.88□□□□□ -0.35
CASC4-201ENST00000299957 ADAMDEC1O15204 470 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms