RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 MRPL9Q9BYD2 267 aaKnown RBP13.04□□□□□ -0.32
CTDP1-202ENST00000299543 ZNF334Q9HCZ1 680 aaPredicted RBP13.04□□□□□ -0.32
CTDP1-202ENST00000299543 KCTD5Q9NXV2 234 aa13.04□□□□□ -0.32
CTDP1-202ENST00000299543 TFECO14948 347 aaPredicted RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 FADS2O95864 444 aaKnown RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 HTR1AP08908 422 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 WEE1P30291 646 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 NSG1P42857 185 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 IRF8Q02556 426 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 DPY19L1Q2PZI1 675 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CARD16Q5EG05 197 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 GTF2IRD2BQ6EKJ0 949 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CEP68Q76N32 757 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 GTF2IRD2Q86UP8 949 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ARMC8Q8IUR7 673 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CLECL1Q8IZS7 167 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 DCAF4L2Q8NA75 395 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ZNF540Q8NDQ6 660 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 GPR156Q8NFN8 814 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 RORBQ92753 470 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 TMEM246Q9BRR3 403 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CWH43Q9H720 699 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ABCB8Q9NUT2 735 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 PPT2Q9UMR5 302 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 SNX6Q9UNH7 406 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 SAMHD1Q9Y3Z3 626 aaKnown RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 GMPPBQ9Y5P6 360 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 TRIM64A6NGJ6 449 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 FPGTO14772 594 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 RFPL2O75678 378 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 SEC14L2O76054 403 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ALOX5P09917 674 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 COX7A2P14406 83 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ENGP17813 658 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 SDC1P18827 310 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 EPHA2P29317 976 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CD40LGP29965 261 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 KIR3DL1P43629 444 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 EPHB3P54753 998 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 TMBIM6P55061 237 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 NCS1P62166 190 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 GPLD1P80108 840 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 FXNQ16595 210 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 PXDC1Q5TGL8 231 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 PDE12Q6L8Q7 609 aaKnown RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 RPL3LQ92901 407 aaKnown RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 HTATIP2Q9BUP3 242 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 PAK1IP1Q9NWT1 392 aaPredicted RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ENPP5Q9UJA9 477 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 LSM7Q9UK45 103 aaKnown RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 ZNF451Q9Y4E5 1061 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 TTC34A8MYJ7 566 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CLIC1O00299 241 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CD9P21926 228 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 PBLDP30039 288 aaPredicted RBP13.03□□□□□ -0.32
CTDP1-202ENST00000299543 MADCAM1Q13477 382 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 COLEC12Q5KU26 742 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 CYP4Z1Q86W10 505 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 PLD3Q8IV08 490 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 SVOPLQ8N434 492 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 FKBP10Q96AY3 582 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 C12orf4Q9NQ89 552 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 FBXO10Q9UK96 956 aa13.03□□□□□ -0.32
CTDP1-202ENST00000299543 MYOFQ9NZM1 2061 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 COL4A4P53420 1690 aaPredicted RBP13.02□□□□□ -0.32
CTDP1-202ENST00000299543 ERN1O75460 977 aaKnown RBP13.02□□□□□ -0.32
CTDP1-202ENST00000299543 CPNE6O95741 557 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 OR56A5P0C7T3 313 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 GSTM2P28161 218 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 MRPL19P49406 292 aaKnown RBP13.02□□□□□ -0.32
CTDP1-202ENST00000299543 ISL1P61371 349 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 CDK5R2Q13319 367 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 NPTX1Q15818 432 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 Q5BKY6 102 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 TRIM46Q7Z4K8 759 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 GPR149Q86SP6 731 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 LMNTD1Q8N9Z9 388 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 IGSF21Q96ID5 467 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 P2RY13Q9BPV8 354 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 TUBA1CQ9BQE3 449 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 NTMT1Q9BV86 223 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 CCDC177Q9NQR7 707 aaPredicted RBP13.02□□□□□ -0.32
CTDP1-202ENST00000299543 SH3BP4Q9P0V3 963 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 TRPS1Q9UHF7 1281 aa13.02□□□□□ -0.32
CTDP1-202ENST00000299543 CHD5Q8TDI0 1954 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 SEMA3DO95025 777 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 INHAP05111 366 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 CLDN8P56748 225 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 ADPRMQ3LIE5 342 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 XKR6Q5GH73 641 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 ASCC1Q8N9N2 400 aaKnown RBP13.02□□□□□ -0.33
CTDP1-202ENST00000299543 FLCNQ8NFG4 579 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 WDR12Q9GZL7 423 aaKnown RBP13.02□□□□□ -0.33
CTDP1-202ENST00000299543 RPRD1BQ9NQG5 326 aaKnown RBP13.02□□□□□ -0.33
CTDP1-202ENST00000299543 TMEM9Q9P0T7 183 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 OR51B4Q9Y5P0 310 aa13.02□□□□□ -0.33
CTDP1-202ENST00000299543 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.01□□□□□ -0.33
CTDP1-202ENST00000299543 HOXA2O43364 376 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 GBAP04062 536 aa13.01□□□□□ -0.33
CTDP1-202ENST00000299543 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms