RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 MED13Q9UHV7 2174 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 SHANK1Q9Y566 2161 aa20.28■□□□□ 0.84
SMCO4-201ENST00000298966 GRID2O43424 1007 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 SEMA7AO75326 666 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 POP7O75817 140 aaKnown RBP20.27■□□□□ 0.84
SMCO4-201ENST00000298966 ANKRD34CP0C6C1 535 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 CYP2A7P20853 494 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 TGFBIQ15582 683 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 PPP1R3AQ16821 1122 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 IYDQ6PHW0 289 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 ZCCHC23Q6ZST2 131 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 AMZ2Q86W34 360 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 RASGRP3Q8IV61 690 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 APLFQ8IW19 511 aaPredicted RBP20.27■□□□□ 0.84
SMCO4-201ENST00000298966 RNF31Q96EP0 1072 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 TRIM55Q9BYV6 548 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 UNKQ9C0B0 810 aaKnown RBP20.27■□□□□ 0.84
SMCO4-201ENST00000298966 COG4Q9H9E3 785 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 ZNHIT2Q9UHR6 403 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 HAO1Q9UJM8 370 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 STK38LQ9Y2H1 464 aa20.27■□□□□ 0.84
SMCO4-201ENST00000298966 MN1Q10571 1320 aaPredicted RBP20.27■□□□□ 0.83
SMCO4-201ENST00000298966 PIPSLA2A3N6 862 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 GFYI3L273 518 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 UBXN8O00124 270 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 MATN4O95460 622 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 HSPA4LO95757 839 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 DDAH2O95865 285 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 PDGFAP04085 211 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 HIST1H2AGP0C0S8 130 aaPredicted RBP20.26■□□□□ 0.83
SMCO4-201ENST00000298966 HIST1H2ADP20671 130 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 NAGLUP54802 743 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 PRKAA1Q13131 559 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 SULT1C3Q6IMI6 304 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 CHST15Q7LFX5 561 aaPredicted RBP20.26■□□□□ 0.83
SMCO4-201ENST00000298966 ZNF547Q8IVP9 402 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 BEND7Q8N7W2 519 aaPredicted RBP20.26■□□□□ 0.83
SMCO4-201ENST00000298966 FBXO15Q8NCQ5 510 aaPredicted RBP20.26■□□□□ 0.83
SMCO4-201ENST00000298966 ASB11Q8WXH4 323 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 HIST1H2AHQ96KK5 128 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 HIST1H2AJQ99878 128 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 H2AFJQ9BTM1 129 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 TBC1D10AQ9BXI6 508 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 PARVBQ9HBI1 364 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 CD274Q9NZQ7 290 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 TBC1D29Q9UFV1 150 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 ABCA12Q86UK0 2595 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 DOPEY1Q5JWR5 2465 aa20.26■□□□□ 0.83
SMCO4-201ENST00000298966 SLCO1B7G3V0H7 640 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 CREG1O75629 220 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 KIAA0754O94854 1291 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 RECKO95980 971 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 CATP04040 527 aaKnown RBP20.25■□□□□ 0.83
SMCO4-201ENST00000298966 CCNYL3P0C7X3 344 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 RNF224P0DH78 156 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 KCNC1P48547 511 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 HNMTP50135 292 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 SETDB1Q15047 1291 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 ZNF678Q5SXM1 525 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 UBE2R2Q712K3 238 aaPredicted RBP20.25■□□□□ 0.83
SMCO4-201ENST00000298966 C11orf96Q7Z7L8 435 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 WDR75Q8IWA0 830 aaKnown RBP20.25■□□□□ 0.83
SMCO4-201ENST00000298966 AFAP1L2Q8N4X5 818 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 PTGR2Q8N8N7 351 aaPredicted RBP20.25■□□□□ 0.83
SMCO4-201ENST00000298966 AVL9Q8NBF6 648 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 PIWIL2Q8TC59 973 aaKnown RBP20.25■□□□□ 0.83
SMCO4-201ENST00000298966 MAGEC3Q8TD91 643 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 MCOLN3Q8TDD5 553 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 ILKAPQ9H0C8 392 aaPredicted RBP20.25■□□□□ 0.83
SMCO4-201ENST00000298966 ACSL5Q9ULC5 683 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 KCNK6Q9Y257 313 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 RAP2CQ9Y3L5 183 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 MAP4K5Q9Y4K4 846 aa20.25■□□□□ 0.83
SMCO4-201ENST00000298966 LRBAP50851 2863 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 KIR2DS5A0A0G2JLQ3 304 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 A0A0G2JNG1 304 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 ERICH4A6NGS2 130 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 LILRA5A6NI73 299 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 OR5K4A6NMS3 321 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 KIR2DS3K7RE56 304 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 PSIP1O75475 530 aaKnown RBP20.24■□□□□ 0.83
SMCO4-201ENST00000298966 ANXA5P08758 320 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 PGDP52209 483 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 DNASE1L3Q13609 305 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 IL11RAQ14626 422 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 KIR2DS5Q14953 304 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 PCBP2Q15366 365 aaKnown RBP eCLIP20.24■□□□□ 0.83
SMCO4-201ENST00000298966 PFKFB4Q16877 469 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 ZNF787Q6DD87 383 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 C6orf89Q6UWU4 347 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 UNC5DQ6UXZ4 953 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 NAPRTQ6XQN6 538 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 FRMD7Q6ZUT3 714 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 CFAP206Q8IYR0 622 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 UBTD2Q8WUN7 234 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 SKA2Q8WVK7 121 aaPredicted RBP20.24■□□□□ 0.83
SMCO4-201ENST00000298966 C10orf82Q8WW14 230 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 EXT2Q93063 718 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 FAR2Q96K12 515 aa20.24■□□□□ 0.83
SMCO4-201ENST00000298966 TMEM237Q96Q45 408 aa20.24■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms