RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 C11orf24Q96F05 449 aaPredicted RBP11.36□□□□□ -0.59
RHO-201ENST00000296271 PYURFQ96I23 114 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 LGR4Q9BXB1 951 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 SH3BP4Q9P0V3 963 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 CCDC88CQ9P219 2028 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 ACSL6Q9UKU0 697 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 HCN2Q9UL51 889 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 GNG14A0A1W2PPG7 69 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 TRIM64A6NGJ6 449 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 LATO43561 262 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 XYLBO75191 536 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 AP2A2O94973 939 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 OPN1SWP03999 348 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 HTR1AP08908 422 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 CDK4P11802 303 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 EN2P19622 333 aaPredicted RBP11.36□□□□□ -0.59
RHO-201ENST00000296271 MATN1P21941 496 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 PRPH2P23942 346 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 DDX6P26196 483 aaKnown RBP eCLIP11.36□□□□□ -0.59
RHO-201ENST00000296271 GPR1P46091 355 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 CDK9P50750 372 aaKnown RBP11.36□□□□□ -0.59
RHO-201ENST00000296271 ST8SIA6P61647 398 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 MTAPQ13126 283 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 SIM2Q14190 667 aaPredicted RBP11.36□□□□□ -0.59
RHO-201ENST00000296271 DUOXA1Q1HG43 343 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 TMEM259Q4ZIN3 620 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 COX20Q5RI15 118 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 LDLRAP1Q5SW96 308 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.36□□□□□ -0.59
RHO-201ENST00000296271 LIPJQ5W064 366 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 LAIR1Q6GTX8 287 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 ERAP2Q6P179 960 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 SLCO4C1Q6ZQN7 724 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 ARMCX6Q7L4S7 300 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 R3HCC1LQ7Z5L2 792 aaKnown RBP11.36□□□□□ -0.59
RHO-201ENST00000296271 GPR141Q7Z602 305 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 ZDHHC21Q8IVQ6 265 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 ETFBKMTQ8IXQ9 262 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 SP7Q8TDD2 431 aaPredicted RBP11.36□□□□□ -0.59
RHO-201ENST00000296271 UBE2FQ969M7 185 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 CCDC138Q96M89 665 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 RMND5AQ9H871 391 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 CXorf21Q9HAI6 301 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 CD320Q9NPF0 282 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 SLC23A2Q9UGH3 650 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 ZNF451Q9Y4E5 1061 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 F5P12259 2224 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 TRPM6Q9BX84 2022 aa11.36□□□□□ -0.59
RHO-201ENST00000296271 C2orf16Q68DN1 1984 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 TRIM64CA6NLI5 447 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 KLHL18O94889 574 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 CATP04040 527 aaKnown RBP11.35□□□□□ -0.59
RHO-201ENST00000296271 PRPS1L1P21108 318 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 ZNF234Q14588 700 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 BORAQ6PGQ7 559 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 OR56A3Q8NH54 315 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 OR5AK3PQ8NH89 298 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 CNIH3Q8TBE1 160 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 NELL1Q92832 810 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 GLMNQ92990 594 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 REXO5Q96IC2 774 aaKnown RBP11.35□□□□□ -0.59
RHO-201ENST00000296271 TPD52L3Q96J77 140 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 SH3GL3Q99963 347 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 ING2Q9H160 280 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 FANCEQ9HB96 536 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 PAK1IP1Q9NWT1 392 aaPredicted RBP11.35□□□□□ -0.59
RHO-201ENST00000296271 RAPGEFL1Q9UHV5 662 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 NINQ8N4C6 2090 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 hCG_2014768A0A024R1R8 64 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 KPNA5O15131 536 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 XPNPEP2O43895 674 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 PCDH7O60245 1069 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 LZTS3O60299 673 aaPredicted RBP11.35□□□□□ -0.59
RHO-201ENST00000296271 POP7O75817 140 aaKnown RBP11.35□□□□□ -0.59
RHO-201ENST00000296271 CA3P07451 260 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 TUBA4AP68366 448 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 CD47Q08722 323 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 ABHD18Q0P651 414 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 SLBPQ14493 270 aaKnown RBP eCLIP11.35□□□□□ -0.59
RHO-201ENST00000296271 GRHL2Q6ISB3 625 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 ANGPTL8Q6UXH0 198 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 NLRP8Q86W28 1048 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 PARP8Q8N3A8 854 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 CHCHD4Q8N4Q1 142 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 CELF5Q8N6W0 485 aaKnown RBP11.35□□□□□ -0.59
RHO-201ENST00000296271 TNIP2Q8NFZ5 429 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 OR5AR1Q8NGP9 310 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 KLK6Q92876 244 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 NUS1Q96E22 293 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 VPS35Q96QK1 796 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 SH3GL1Q99961 368 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 DUSP26Q9BV47 211 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 TPT1P8Q9HAU6 139 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 GPATCH2Q9NW75 528 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 SIRT5Q9NXA8 310 aa11.35□□□□□ -0.59
RHO-201ENST00000296271 A0A1W2PPW3 197 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 PTGES3LE9PB15 166 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 STATHP02808 62 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 RETP07949 1114 aa11.34□□□□□ -0.59
RHO-201ENST00000296271 ADRB3P13945 408 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms