RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 CSTF2P33240 577 aaKnown RBP eCLIP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 GSTM4Q03013 218 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 CCDC80Q76M96 950 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 GOLM1Q8NBJ4 401 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 TXNDC5Q8NBS9 432 aaKnown RBP12.43□□□□□ -0.42
PTCD1-201ENST00000292478 RAB7BQ96AH8 199 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 KCNH6Q9H252 994 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 ACSL5Q9ULC5 683 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 RNF11Q9Y3C5 154 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 PCDHGA2Q9Y5H1 932 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 FGF18O76093 207 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 AUTS2Q8WXX7 1259 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 RTP4Q96DX8 246 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 SPATA9Q9BWV2 254 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 PLEKHA1Q9HB21 404 aa12.43□□□□□ -0.42
PTCD1-201ENST00000292478 KLHL33A6NCF5 533 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NDUFS4O43181 175 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TPST2O60704 377 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 RGS20O76081 388 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 ARCN1P48444 511 aaKnown RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NFATC2Q13469 925 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NADK2Q4G0N4 442 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 OLFML2AQ68BL7 652 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NAPRTQ6XQN6 538 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 HACD2Q6Y1H2 254 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TMCO2Q7Z6W1 182 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 GPALPP1Q8IXQ4 340 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TRAM1L1Q8N609 369 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 DENND1AQ8TEH3 1009 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 DGAT2Q96PD7 388 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NSUN3Q9H649 340 aaKnown RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 B4GALT6Q9UBX8 382 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 INPPL1O15357 1258 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 COCHO43405 550 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 ITGA10O75578 1167 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 GNSP15586 552 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 HRH2P25021 359 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 OLIG2Q13516 323 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 MOGSQ13724 837 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TEAD2Q15562 447 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TOR1AIP1Q5JTV8 583 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 QSOX2Q6ZRP7 698 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 BTN2A1Q7KYR7 527 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 GALNT7Q86SF2 657 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 PLD6Q8N2A8 252 aaKnown RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TSTD1Q8NFU3 115 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 KLK6Q92876 244 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 FCRL3Q96P31 734 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 EPYCQ99645 322 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 SLC2A11Q9BYW1 496 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 PDLIM7Q9NR12 457 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NKIRAS2Q9NYR9 191 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 FAM25EA8MYX2 175 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 AGRPO00253 132 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 ACOX3O15254 700 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 MTX2O75431 263 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NR4A1P22736 598 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 S100A1P23297 94 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 ZNF763Q0D2J5 394 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 SMARCD3Q6STE5 483 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 HSH2DQ96JZ2 352 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 CERS4Q9HA82 394 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 MED31Q9Y3C7 131 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 SPIN1Q9Y657 262 aaPredicted RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 BCHEP06276 602 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 SPANXN4Q5MJ08 99 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 TUBA3EQ6PEY2 450 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 NFKBIDQ8NI38 313 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 SAMD11Q96NU1 681 aa12.42□□□□□ -0.42
PTCD1-201ENST00000292478 CCDC59Q9P031 241 aaKnown RBP12.42□□□□□ -0.42
PTCD1-201ENST00000292478 H0YAE9 185 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 MAFKO60675 156 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 GATBO75879 557 aaKnown RBP12.41□□□□□ -0.42
PTCD1-201ENST00000292478 TAS2R50P59544 299 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 CBX3Q13185 183 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SLC8B1Q6J4K2 584 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 KLHDC10Q6PID8 442 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 CEACAM20Q6UY09 585 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 OR2AJ1Q8NGZ0 328 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 IRF7Q92985 503 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 ZSWIM3Q96MP5 696 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 KCNC2Q96PR1 638 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 KCNS3Q9BQ31 491 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 RPF2Q9H7B2 306 aaKnown RBP12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SERINC1Q9NRX5 453 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SNTG1Q9NSN8 517 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 BACE2Q9Y5Z0 518 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 A0A096LPI6 279 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 M0QX08 132 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 MMP20O60882 483 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 ACSL1P33121 698 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 RPS13P62277 151 aaKnown RBP12.41□□□□□ -0.42
PTCD1-201ENST00000292478 MXD1Q05195 221 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 NIPAL4Q0D2K0 466 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 C6orf136Q5SQH8 315 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 DLK2Q6UY11 383 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 AMIGO3Q86WK7 504 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SLITRK4Q8IW52 837 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 KAT2AQ92830 837 aa12.41□□□□□ -0.42
PTCD1-201ENST00000292478 SLC39A3Q9BRY0 314 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms