RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 STX2P32856 288 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SPRP35270 261 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 DLSTP36957 453 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PPM1FP49593 454 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ARL4DP49703 201 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 RAB10P61026 200 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ARF3P61204 181 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 TBPL1P62380 186 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 RHDQ02161 417 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 NAE1Q13564 534 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 DNASE1L3Q13609 305 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 TGFBIQ15582 683 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 OR4D1Q15615 310 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 TSNQ15631 228 aaKnown RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ZC3H12BQ5HYM0 836 aaKnown RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 WASHC2DQ5SRD0 308 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 YOD1Q5VVQ6 348 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SH2D5Q6ZV89 423 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 CCDC25Q86WR0 208 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SYTL1Q8IYJ3 562 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 MYO1HQ8N1T3 1032 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SPATA6LQ8N4H0 392 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF655Q8N720 491 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PROKR1Q8TCW9 393 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 DCAKDQ8WVC6 231 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 IFT81Q8WYA0 676 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 CDKL2Q92772 493 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 KIAA1191Q96A73 305 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PRAP1Q96NZ9 151 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ATOH8Q96SQ7 321 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 CYTH2Q99418 400 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 FMO2Q99518 471 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SEMA4CQ9C0C4 833 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PCBD2Q9H0N5 130 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 TSPYL1Q9H0U9 437 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ATG10Q9H0Y0 220 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SLC26A1Q9H2B4 701 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 GPN2Q9H9Y4 310 aaPredicted RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 GPAMQ9HCL2 828 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 STARD5Q9NSY2 213 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 DHCR7Q9UBM7 475 aaKnown RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 PTBP2Q9UKA9 531 aaKnown RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 SNX7Q9UNH6 387 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 FARSAQ9Y285 508 aaKnown RBP8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF462Q96JM2 2506 aa8.75□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF839A8K0R7 811 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 P2RX6O15547 441 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 KLK8O60259 260 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 C2P06681 752 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ABHD2P08910 425 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 HBQ1P09105 142 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 CCDC166P0CW27 439 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 SMIM10L1P0DMW3 83 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 CYP2A7P20853 494 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 HRH2P25021 359 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 TNFRSF8P28908 595 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 CMPK1P30085 196 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 EFNA3P52797 238 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 HYAL2Q12891 473 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 IL10RAQ13651 578 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 USP10Q14694 798 aaKnown RBP8.74□□□□□ -1.01
HMGN1-201ENST00000288344 C18orf21Q32NC0 220 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-201ENST00000288344 PTCHD3Q3KNS1 767 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 TCTE1Q5JU00 501 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ATP1A1-AS1Q5TC04 95 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 FAM69BQ5VUD6 431 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 OVCH1Q7RTY7 1134 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 CMC1Q7Z7K0 106 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 TMEM126BQ8IUX1 230 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 PLD6Q8N2A8 252 aaKnown RBP8.74□□□□□ -1.01
HMGN1-201ENST00000288344 RAB42Q8N4Z0 105 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 MEIOBQ8N635 442 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 MZB1Q8WU39 189 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 STARD8Q92502 1023 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 PYCR2Q96C36 320 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 SMIM10Q96HG1 83 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 UBL7Q96S82 380 aaPredicted RBP8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ZFYVE21Q9BQ24 234 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 TMEM79Q9BSE2 394 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 EFHD1Q9BUP0 239 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 GRIP2Q9C0E4 1043 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 AICDAQ9GZX7 198 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 SPNS1Q9H2V7 528 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ANKZF1Q9H8Y5 726 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 MLXIPLQ9NP71 852 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 MRPS30Q9NP92 439 aaKnown RBP8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ATP13A2Q9NQ11 1180 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ARL15Q9NXU5 204 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF180Q9UJW8 692 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 KCND3Q9UK17 655 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 TCFL5Q9UL49 500 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 ASB1Q9Y576 335 aa8.74□□□□□ -1.01
HMGN1-201ENST00000288344 DOCK10Q96BY6 2186 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 A0A0J9YVX5 310 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 CCDC189A1A4V9 331 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 SERTM1A2A2V5 107 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 HYKKA2RU49 373 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 ZNF891A8MT65 544 aaPredicted RBP8.73□□□□□ -1.01
HMGN1-201ENST00000288344 HAT1O14929 419 aa8.73□□□□□ -1.01
HMGN1-201ENST00000288344 DSCR3O14972 297 aa8.73□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 104.2 ms