RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 VWA5B2Q8N398 1253 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 OR9Q2Q8NGE9 314 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 NELL1Q92832 810 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 C11orf24Q96F05 449 aaPredicted RBP15.81■□□□□ 0.12
GPC1-201ENST00000264039 ATOH8Q96SQ7 321 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 MTERF1Q99551 399 aaKnown RBP15.81■□□□□ 0.12
GPC1-201ENST00000264039 TINF2Q9BSI4 451 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 FAM126AQ9BYI3 521 aaPredicted RBP15.81■□□□□ 0.12
GPC1-201ENST00000264039 SERHL2Q9H4I8 314 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 SERHLQ9NQF3 203 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 MAPRE3Q9UPY8 281 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 RWDD3Q9Y3V2 267 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 KCNE2Q9Y6J6 123 aa15.81■□□□□ 0.12
GPC1-201ENST00000264039 ARHGEF15O94989 841 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ADORA3P0DMS8 318 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 IRF1P10914 325 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PRKCDQ05655 676 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ACSM2AQ08AH3 577 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ACSM2BQ68CK6 577 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 SHQ1Q6PI26 577 aaKnown RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 PLPPR4Q7Z2D5 763 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GALNT7Q86SF2 657 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PKP4Q99569 1192 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 SAV1Q9H4B6 383 aaPredicted RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 TVP23BQ9NYZ1 205 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 MGAT4AQ9UM21 535 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 NOD1Q9Y239 953 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 RGS13O14921 159 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 POLR1CO15160 346 aaPredicted RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 FGF10O15520 208 aaPredicted RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 FFAR2O15552 330 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 CCNB2O95067 398 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 CCNDBP1O95273 360 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 IGFBP6P24592 240 aaPredicted RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 KDELR2P33947 212 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GRK5P34947 590 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GSTM5P46439 218 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PTPRRQ15256 657 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PTCHD3Q3KNS1 767 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ZSWIM9Q86XI8 627 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 OR6J1Q8NGC5 347 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 TP53INP1Q96A56 240 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GSTK1Q9Y2Q3 226 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PTPRFP10586 1907 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 LAMB2P55268 1798 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 DOT1LQ8TEK3 1739 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ATXN8OSP0DMR3 200 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ACVRL1P37023 503 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 STC1P52823 247 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GPR68Q15743 365 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ZNF598Q86UK7 904 aaKnown RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 BBS7Q8IWZ6 715 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 ENTHD1Q8IYW4 607 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 THEM5Q8N1Q8 247 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 TTLL2Q9BWV7 592 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GALNT9Q9HCQ5 603 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GLTPQ9NZD2 209 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 GPRC5BQ9NZH0 403 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 RIMKLBQ9ULI2 386 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PRG3Q9Y2Y8 225 aaPredicted RBP15.8■□□□□ 0.12
GPC1-201ENST00000264039 MAP4K5Q9Y4K4 846 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 PCDHGB3Q9Y5G1 929 aa15.8■□□□□ 0.12
GPC1-201ENST00000264039 MAGEB17A8MXT2 336 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 HAS3O00219 553 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 SCO2O43819 266 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 HOXD8P13378 290 aaPredicted RBP15.79■□□□□ 0.12
GPC1-201ENST00000264039 APEX1P27695 318 aaKnown RBP15.79■□□□□ 0.12
GPC1-201ENST00000264039 NRIP1P48552 1158 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 SF1Q15637 639 aaKnown RBP15.79■□□□□ 0.12
GPC1-201ENST00000264039 HDDC2Q7Z4H3 204 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 B3GNT7Q8NFL0 401 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 MED8Q96G25 268 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 MAGEB10Q96LZ2 347 aaPredicted RBP15.79■□□□□ 0.12
GPC1-201ENST00000264039 ZFP3Q96NJ6 502 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 SPATA9Q9BWV2 254 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 TM6SF2Q9BZW4 377 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 SLAMF7Q9NQ25 335 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 LCHNA4D1U4 455 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 ADAMDEC1O15204 470 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 CLEC2LP0C7M8 214 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 UBL4AP11441 157 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 RPL35P42766 123 aaKnown RBP15.79■□□□□ 0.12
GPC1-201ENST00000264039 ARMC12Q5T9G4 340 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 ADGRD2Q7Z7M1 963 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 ADAMTSL2Q86TH1 951 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 COMMD7Q86VX2 200 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 CNTN4Q8IWV2 1026 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 GON7Q9BXV9 100 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 CRTAC1Q9NQ79 661 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 BAIAP2Q9UQB8 552 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 SOCS7O14512 581 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 HOXB8P17481 243 aaPredicted RBP15.79■□□□□ 0.12
GPC1-201ENST00000264039 SLC19A1P41440 591 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 ESCO2Q56NI9 601 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 TOR2AQ5JU69 321 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 SLC46A3Q7Z3Q1 461 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 UBE2Q1Q7Z7E8 422 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 OR7D4Q8NG98 312 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 CCDC32Q9BV29 185 aa15.79■□□□□ 0.12
GPC1-201ENST00000264039 TMEFF2Q9UIK5 374 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 88.3 ms