RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 LIN28AQ9H9Z2 209 aaKnown RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 MKKSQ9NPJ1 570 aaPredicted RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 CDH7Q9ULB5 785 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 NUP98P52948 1817 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 ANXA2P2A6NMY6 339 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 PDCD5O14737 125 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 TEX28O15482 410 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 ERI3O43414 337 aaKnown RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 CLIC3O95833 236 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 SNAI1O95863 264 aaPredicted RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 ANXA2P07355 339 aaKnown RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 CLDN10P78369 228 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 SLC13A2Q13183 592 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 CEACAM7Q14002 265 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 FBXO42Q6P3S6 717 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 ZCCHC12Q6PEW1 402 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 PAMR1Q6UXH9 720 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 MARVELD2Q8N4S9 558 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 CHST4Q8NCG5 386 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 METTL21AQ8WXB1 218 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 HDAC2Q92769 488 aaKnown RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 CAPNS2Q96L46 248 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 MRGPRX2Q96LB1 330 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 C16orf70Q9BSU1 422 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 MKLN1Q9UL63 735 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 PCDHGB1Q9Y5G3 927 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 A0A1W2PRG6 482 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 UBXN7O94888 489 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 PABPC4LP0CB38 370 aaKnown RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 CD72P21854 359 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 ACSL1P33121 698 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 KCNAB2Q13303 367 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 HDDC3Q8N4P3 179 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 CHCHD4Q8N4Q1 142 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 MGME1Q9BQP7 344 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 HERPUD2Q9BSE4 406 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 TAPBPLQ9BX59 468 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 ANKHQ9HCJ1 492 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 HCN4Q9Y3Q4 1203 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 PRMT3O60678 531 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 GSTT2BP0CG30 244 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 CD1DP15813 335 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 HTR1EP28566 365 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 SLC11A1P49279 550 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 AGTR2P50052 363 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 GBX2P52951 348 aaPredicted RBP10.45□□□□□ -0.74
CD44-201ENST00000263398 PPP3R1P63098 170 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 PDGFRLQ15198 375 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 CLEC12AQ5QGZ9 265 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 C22orf39Q6P5X5 142 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 IFNL1Q8IU54 200 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 GOLM1Q8NBJ4 401 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 OR10Q1Q8NGQ4 319 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 OR6K6Q8NGW6 343 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 NEK7Q8TDX7 302 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 RETREG1Q9H6L5 497 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 MARCH7Q9H992 704 aa10.45□□□□□ -0.74
CD44-201ENST00000263398 URB1O60287 2271 aaKnown RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 A0A0X1KG70 313 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 PRODHO43272 600 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 SOCS5O75159 536 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 SLC2A2P11168 524 aaPredicted RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 PSKH1P11801 424 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 CLCNKAP51800 687 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 DCDC1P59894 354 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 ATP6AP1Q15904 470 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 C10orf62Q5T681 223 aaPredicted RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 ATG9BQ674R7 924 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 TICAM1Q8IUC6 712 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 SLC15A3Q8IY34 581 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 NFKBIDQ8NI38 313 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 RTP4Q96DX8 246 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 HSPBAP1Q96EW2 488 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 DMRTB1Q96MA1 342 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 TEPSINQ96N21 525 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 MUS81Q96NY9 551 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 ALPK1Q96QP1 1244 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 GAL3ST4Q96RP7 486 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 YIPF4Q9BSR8 244 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 TRMT61BQ9BVS5 477 aaKnown RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 TNFRSF10DQ9UBN6 386 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 UPB1Q9UBR1 384 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 TAC3Q9UHF0 121 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 MYH13Q9UKX3 1938 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 IGKV6-21A0A0C4DH24 114 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 A0A0D9SEW6 157 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 S1PR4O95977 384 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 HLA-DPB1P04440 258 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 EDNRBP24530 442 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 TAS2R50P59544 299 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 PUDPQ08623 228 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 UNC50Q53HI1 259 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 CYBRD1Q53TN4 286 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 RASSF6Q6ZTQ3 369 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 ASRGL1Q7L266 308 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 MARCH9Q86YJ5 346 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 IFNLR1Q8IU57 520 aaPredicted RBP10.44□□□□□ -0.74
CD44-201ENST00000263398 AQP11Q8NBQ7 271 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 PIGKQ92643 395 aa10.44□□□□□ -0.74
CD44-201ENST00000263398 KCNH6Q9H252 994 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms