RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 EEF1AKMT1Q8WVE0 214 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 SNRNP40Q96DI7 357 aaKnown RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 LINGO1Q96FE5 620 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 TMEM237Q96Q45 408 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 ILKAPQ9H0C8 392 aaPredicted RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 WWP1Q9H0M0 922 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 PHPT1Q9NRX4 125 aaPredicted RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 MARCOQ9UEW3 520 aaPredicted RBP12.84□□□□□ -0.35
SGCA-201ENST00000262018 IKZF3Q9UKT9 509 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 PLEKHM1Q9Y4G2 1056 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 PCDHGA6Q9Y5G7 932 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 NAV3Q8IVL0 2385 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 CROCCQ5TZA2 2017 aa12.84□□□□□ -0.35
SGCA-201ENST00000262018 SYCE1LA8MT33 242 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 FADS2P1A8MWK0 482 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 ZNF195O14628 629 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 DIAPH2O60879 1101 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 UBOX5O94941 541 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 CHRNGP07510 517 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 CCNYL3P0C7X3 344 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 RASSF2P50749 326 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 AQP5P55064 265 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 CDK3Q00526 305 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 GALNT1Q10472 559 aaPredicted RBP12.83□□□□□ -0.36
SGCA-201ENST00000262018 PRKAA1Q13131 559 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 ARL13AQ5H913 290 aaPredicted RBP12.83□□□□□ -0.36
SGCA-201ENST00000262018 GPRC6AQ5T6X5 926 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 ZBTB2Q8N680 514 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 CLDN19Q8N6F1 224 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 CCNYL1Q8N7R7 359 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 ZNF781Q8N8C0 355 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 CT55Q8WUE5 264 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 PNPLA2Q96AD5 504 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 LRRC37BQ96QE4 947 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 VPS35Q96QK1 796 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 PANX3Q96QZ0 392 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 ING2Q9H160 280 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 MYLK2Q9H1R3 596 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 ACTL8Q9H568 366 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 SARS2Q9NP81 518 aaKnown RBP12.83□□□□□ -0.36
SGCA-201ENST00000262018 ASF1BQ9NVP2 202 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 SIDT1Q9NXL6 827 aaKnown RBP12.83□□□□□ -0.36
SGCA-201ENST00000262018 HEY2Q9UBP5 337 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 LNPEPQ9UIQ6 1025 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 TMCO1Q9UM00 188 aa12.83□□□□□ -0.36
SGCA-201ENST00000262018 DIDO1Q9BTC0 2240 aaKnown RBP12.82□□□□□ -0.36
SGCA-201ENST00000262018 NPEPPSL1A6NEC2 478 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 UBXN8O00124 270 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 CDC7O00311 574 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 BTN3A1O00481 513 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 KLK8O60259 260 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 OR56A5P0C7T3 313 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 FASLGP48023 281 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 RGS4P49798 205 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 BNIP1Q12981 228 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 TSNQ15631 228 aaKnown RBP12.82□□□□□ -0.36
SGCA-201ENST00000262018 SPRED3Q2MJR0 410 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 CFAP157Q5JU67 520 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 ZNF678Q5SXM1 525 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 FRMD7Q6ZUT3 714 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 MAVSQ7Z434 540 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 PHYKPLQ8IUZ5 450 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 RASGRP3Q8IV61 690 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 CISD2Q8N5K1 135 aaKnown RBP12.82□□□□□ -0.36
SGCA-201ENST00000262018 PTGR2Q8N8N7 351 aaPredicted RBP12.82□□□□□ -0.36
SGCA-201ENST00000262018 DDHD1Q8NEL9 900 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 SLC37A2Q8TED4 501 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 STON2Q8WXE9 905 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 THAP4Q8WY91 577 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 COX14Q96I36 57 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 TRMOQ9BU70 441 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 PADI1Q9ULC6 663 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 RNF112Q9ULX5 631 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 SLC12A4Q9UP95 1085 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 PCDHGB7Q9Y5F8 929 aa12.82□□□□□ -0.36
SGCA-201ENST00000262018 SUPT3HB4E1H0 165 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 CFAP99D6REC4 459 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 PRSS44E7EML9 344 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 SLCO1B7G3V0H7 640 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 STX16-NPEPL1H3BU86 382 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 EIF3FO00303 357 aaPredicted RBP12.81□□□□□ -0.36
SGCA-201ENST00000262018 STX16O14662 325 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 SUPT3HO75486 399 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 AP2A2O94973 939 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 CBSLP0DN79 551 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 ATP1B2P14415 290 aaPredicted RBP12.81□□□□□ -0.36
SGCA-201ENST00000262018 CBSP35520 551 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 RPL14P50914 215 aaKnown RBP12.81□□□□□ -0.36
SGCA-201ENST00000262018 HERVK_113P63132 956 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 GBX1Q14549 363 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 TTLL9Q3SXZ7 439 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 UNC50Q53HI1 259 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 LDLRAP1Q5SW96 308 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 FAM91A1Q658Y4 838 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 MTDHQ86UE4 582 aaKnown RBP12.81□□□□□ -0.36
SGCA-201ENST00000262018 RBMXL3Q8N7X1 1067 aaKnown RBP12.81□□□□□ -0.36
SGCA-201ENST00000262018 GLYATL1Q969I3 302 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 ERP27Q96DN0 273 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 PHF21BQ96EK2 531 aa12.81□□□□□ -0.36
SGCA-201ENST00000262018 DCUN1D1Q96GG9 259 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms