RNA–Protein interactions for RNA: ENST00000261517.9

VPS13C-202, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 13,400 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-202ENST00000261517 CMTM8Q8IZV2 173 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 RHBDF1Q96CC6 855 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 TMEM74Q96NL1 305 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 MEPEQ9NQ76 525 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 KLHL1Q9NR64 748 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 FBXO9Q9UK97 447 aaPredicted RBP4.2□□□□□ -1.74
VPS13C-202ENST00000261517 GTF2A1LQ9UNN4 478 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 NUP205Q92621 2012 aa4.2□□□□□ -1.74
VPS13C-202ENST00000261517 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 A0A1W2PRB8 838 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SNAI1O95863 264 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TIMP1P01033 207 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FHP07954 510 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 HTR1EP28566 365 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 EPHA3P29320 983 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GSTT1P30711 240 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CCL23P55773 120 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ANKDD1AQ495B1 522 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC44A3Q8N4M1 653 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MINDY1Q8N5J2 469 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DENND6BQ8NEG7 585 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NDNQ99608 321 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CGREF1Q99674 301 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CRISPLD1Q9H336 500 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PLEKHA1Q9HB21 404 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CAPN8A6NHC0 703 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 LSM1O15116 133 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 INPPL1O15357 1258 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ALDOAP04075 364 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CDK4P11802 303 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DAG1Q14118 895 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PRAMEF19Q5SWL8 479 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 OR52E8Q6IFG1 317 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 RD3Q7Z3Z2 195 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZFAND4Q86XD8 727 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZDHHC21Q8IVQ6 265 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 LIX1Q8N485 282 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FAM86B1Q8N7N1 296 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SMARCD2Q92925 531 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 LRRC58Q96CX6 371 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 WDR92Q96MX6 357 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 VRK1Q99986 396 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ZNF559Q9BR84 538 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CLCA3PQ9Y6N3 262 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TISP43B9A030 160 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DUX1O43812 170 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CTSAP10619 480 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DCAF7P61962 342 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DGKZQ13574 1117 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ABHD12BQ7Z5M8 362 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 RAB43Q86YS6 212 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 IZUMO1Q8IYV9 350 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FNDC8Q8TC99 324 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 AGAP11Q8TF27 550 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 INPP5EQ9NRR6 644 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FKBPLQ9UIM3 349 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CENPBD1B2RD01 187 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CLDN25C9JDP6 229 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 FFAR3O14843 346 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GPR42O15529 346 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ENDOD1O94919 500 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ITGB7P26010 798 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ALDH3A2P51648 485 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC7A9P82251 487 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SCARB2Q14108 478 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 LPIN1Q14693 890 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PCBP2Q15366 365 aaKnown RBP eCLIP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC25A24Q6NUK1 477 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PLXDC1Q8IUK5 500 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TANKQ92844 425 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NAA11Q9BSU3 229 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 TBL1XR1Q9BZK7 514 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 REEP4Q9H6H4 257 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MRPL39Q9NYK5 338 aaKnown RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 V9GYQ6 96 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KIR2DS5A0A0G2JLQ3 304 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 A0A0G2JNG1 304 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KIR2DS3K7RE56 304 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GPR32O75388 356 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GLULP15104 373 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 DCDC1P59894 354 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 KIR2DS5Q14953 304 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NEDD8Q15843 81 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GDF6Q6KF10 455 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 C10orf82Q8WW14 230 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PYDC1Q8WXC3 89 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 NAT6Q93015 286 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PYURFQ96I23 114 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 CCNL2Q96S94 520 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 WDR55Q9H6Y2 383 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PTPRHQ9HD43 1115 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PIGVQ9NUD9 493 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 PDP1Q9P0J1 537 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 EVLQ9UI08 416 aaPredicted RBP4.19□□□□□ -1.74
VPS13C-202ENST00000261517 ADAM29Q9UKF5 820 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC6A5Q9Y345 797 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 SLC19A2O60779 497 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 GPR37L1O60883 481 aa4.19□□□□□ -1.74
VPS13C-202ENST00000261517 MAP3K6O95382 1288 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms