RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 TYRP14679 529 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 ZNF19P17023 458 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 HSD17B2P37059 387 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 PREPP48147 710 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 PRKCDQ05655 676 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 LAPTM4AQ15012 233 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 GPR33Q49SQ1 333 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 FRG2Q64ET8 278 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 TRIM74Q86UV6 250 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 FOXRED2Q8IWF2 684 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 TMEM74Q96NL1 305 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 FRG2BQ96QU4 278 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 ADAM7Q9H2U9 754 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 NPIPA1Q9UND3 350 aa11.77□□□□□ -0.52
COL8A1-201ENST00000261037 TYRP1P17643 537 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 XRCC1P18887 633 aaPredicted RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 DNAJA1P31689 397 aaKnown RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SLC11A1P49279 550 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 MSS51Q4VC12 460 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 MS4A13Q5J8X5 152 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 PRAMEF17Q5VTA0 474 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 PIGWQ7Z7B1 504 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CMTR2Q8IYT2 770 aaKnown RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SAMD14Q8IZD0 417 aaPredicted RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CLDN19Q8N6F1 224 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 OR2AP1Q8NGE2 309 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 THEM6Q8WUY1 208 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CANT1Q8WVQ1 401 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SGCDQ92629 289 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 OR51B5Q9H339 312 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 GLOD5A6NK44 160 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 FAM170BA6NMN3 283 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 TSPAN9O75954 239 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CNTN5O94779 1100 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 C6orf47O95873 294 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CDH15P55291 814 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 WDR4P57081 412 aaKnown RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SLC25A11Q02978 314 aaKnown RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 DAG1Q14118 895 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 TSTQ16762 297 aaKnown RBP11.77□□□□□ -0.53
COL8A1-201ENST00000261037 ARL9Q6T311 187 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 RASGEF1AQ8N9B8 481 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SLC22A18Q96BI1 424 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CCDC120Q96HB5 630 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SERINC1Q9NRX5 453 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 SLIT2O94813 1529 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 UPK3BL1B0FP48 263 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 UPK3BL2E5RIL1 263 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 DLX3O60479 287 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CCNOP22674 350 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 CNPY1Q3B7I2 92 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 NCSTNQ92542 709 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 ACDQ96AP0 544 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 TAMM41Q96BW9 452 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 TM9SF2Q99805 663 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 NDC1Q9BTX1 674 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 GNG8Q9UK08 70 aa11.77□□□□□ -0.53
COL8A1-201ENST00000261037 ZNF878C9JN71 531 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 IFI30P13284 250 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 DNASE1L3Q13609 305 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 ARFRP1Q13795 201 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 C1orf216Q8TAB5 229 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 ANKRA2Q9H9E1 313 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 SCML2Q9UQR0 700 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 ASB3Q9Y575 518 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 PCDHGB7Q9Y5F8 929 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 CLDN25C9JDP6 229 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 KDELR3O43731 214 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 ORC5O43913 435 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 MATN1P21941 496 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 CCNHP51946 323 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 GPX6P59796 221 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 SLC39A4Q6P5W5 647 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 CEACAM20Q6UY09 585 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 GLIS1Q8NBF1 620 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 AQP11Q8NBQ7 271 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 SUN3Q8TAQ9 357 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 TMEM175Q9BSA9 504 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 LYARQ9NX58 379 aaKnown RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 A0A1W2PRQ8 180 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 FAM159BA6NKW6 160 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 DUXAA6NLW8 204 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 C9J4A7 227 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 H1F0P07305 194 aaKnown RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 G6PDP11413 515 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 DPY19L1Q2PZI1 675 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 PRRT3Q5FWE3 981 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 CAMKVQ8NCB2 501 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 SLC35B2Q8TB61 432 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 KCTD13Q8WZ19 329 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 CGREF1Q99674 301 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 HERC2P3Q9BVR0 1158 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 HSD3B7Q9H2F3 369 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 USP29Q9HBJ7 922 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 PAK6Q9NQU5 681 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-201ENST00000261037 A0A0D9SEW6 157 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 HYKKA2RU49 373 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 LEFTY2O00292 366 aa11.76□□□□□ -0.53
COL8A1-201ENST00000261037 LSM1O15116 133 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms