RNA–Protein interactions for RNA: ENST00000259605.10

RNF38-201, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 5,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-201ENST00000259605 ZMPSTE24O75844 475 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 OR5F1O95221 314 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 LGI1O95970 557 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 ITGB2P05107 769 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 BMP1P13497 986 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 PVALBP20472 110 aaPredicted RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 KCNC1P48547 511 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 GSK3BP49841 420 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 TMPRSS3P57727 454 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 TSPAN5P62079 268 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 GNB2P62879 340 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 CXADRP78310 365 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 DLG4P78352 724 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 CHAF1BQ13112 559 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 DEFB109BQ30KR1 87 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 MSS51Q4VC12 460 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 MANEALQ5VSG8 457 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 AGAP7PQ5VUJ5 663 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 STEAP3Q658P3 488 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 PIWIL4Q7Z3Z4 852 aaKnown RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 C2orf73Q8N5S3 287 aaPredicted RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 EXD3Q8N9H8 876 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 CHST4Q8NCG5 386 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 ZSWIM2Q8NEG5 633 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 C9orf43Q8TAL5 461 aaPredicted RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 FGF13Q92913 245 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 HDAC10Q969S8 669 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 AKR1E2Q96JD6 320 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 AGAP4Q96P64 663 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 QKIQ96PU8 341 aaKnown RBP eCLIP3.93□□□□□ -1.782e-11■■■□□ 16.4
RNF38-201ENST00000259605 CYP2S1Q96SQ9 504 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 WDR77Q9BQA1 342 aaPredicted RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 PRMT8Q9NR22 394 aaPredicted RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 CENPMQ9NSP4 180 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 ABRACLQ9P1F3 81 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 LRIT1Q9P2V4 623 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 ZMAT5Q9UDW3 170 aaKnown RBP3.93□□□□□ -1.78
RNF38-201ENST00000259605 IL20RAQ9UHF4 553 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 PRELID3BQ9Y3B1 194 aa3.93□□□□□ -1.78
RNF38-201ENST00000259605 ARHGEF33A8MVX0 844 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 EI24O14681 340 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MSI1O43347 362 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 RAD51DO75771 328 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SEC24DO94855 1032 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 BCL10O95999 233 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CLPTM1O96005 669 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RPLP0P05388 317 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 ASGR2P07307 311 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FAM58BPP0C7Q3 252 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ITGB5P18084 799 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GSTM3P21266 225 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CD82P27701 267 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MPLP40238 635 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 EIF2B2P49770 351 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 PCBD1P61457 104 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RPL38P63173 70 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPLD1P80108 840 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TMED1Q13445 227 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 EXT1Q16394 746 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PDK4Q16654 411 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CDKN3Q16667 212 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TATDN3Q17R31 274 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SLC35G1Q2M3R5 365 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MAMDC4Q6UXC1 1216 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 UNC5DQ6UXZ4 953 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 BNC2Q6ZN30 1099 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 FRRS1Q6ZNA5 592 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 GAREM2Q75VX8 874 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SLC26A9Q7LBE3 791 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 NLRP14Q86W24 1093 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 C1orf87Q8N0U7 546 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FBXL14Q8N1E6 418 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TMEM161BQ8NDZ6 487 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CHDHQ8NE62 594 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 OR2L3Q8NG85 312 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 BORCS5Q969J3 196 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 UBE2FQ969M7 185 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 FKBP10Q96AY3 582 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 DDIT4LQ96D03 193 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CENPNQ96H22 339 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 RNF145Q96MT1 663 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 PTPN18Q99952 460 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 MRPL57Q9BQC6 102 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 ENKD1Q9H0I2 346 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 IFT46Q9NQC8 304 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TAS2R7Q9NYW3 318 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ZNF282Q9UDV7 671 aaPredicted RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 FBXO4Q9UKT5 387 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 VWA7Q9Y334 891 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 NUMBLQ9Y6R0 609 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TRAV17A0A0B4J275 112 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 C2orf92A0A1B0GVN3 265 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 SAGE2PA6NJ88 616 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 UBFD1O14562 309 aaKnown RBP3.92□□□□□ -1.78
RNF38-201ENST00000259605 GPR171O14626 319 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 ECI2O75521 394 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 RFPL1O75677 317 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 TNFSF15O95150 251 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 LDLRP01130 860 aa3.92□□□□□ -1.78
RNF38-201ENST00000259605 CHRNGP07510 517 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms