RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 NPIPA1Q9UND3 350 aa11.96□□□□□ -0.49
CSHL1-201ENST00000259003 SH2B3Q9UQQ2 575 aa11.96□□□□□ -0.49
CSHL1-201ENST00000259003 ZNF835Q9Y2P0 537 aa11.96□□□□□ -0.49
CSHL1-201ENST00000259003 CRYL1Q9Y2S2 319 aa11.96□□□□□ -0.49
CSHL1-201ENST00000259003 NINQ8N4C6 2090 aa11.96□□□□□ -0.5
CSHL1-201ENST00000259003 NCKAP5O14513 1909 aa11.96□□□□□ -0.5
CSHL1-201ENST00000259003 TCRBV7S3A2A0A539 114 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 BTNL10A8MVZ5 291 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 NDUFS3O75489 264 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 APRTP07741 180 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 ANXA5P08758 320 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 C8orf89P0DMQ9 161 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 FDXRP22570 491 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 RPS3P23396 243 aaKnown RBP eCLIP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 RPA3P35244 121 aaPredicted RBP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 RPL22P35268 128 aaKnown RBP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 FDFT1P37268 417 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 TTPAP49638 278 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 NR0B1P51843 470 aaKnown RBP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 KLHL38Q2WGJ6 581 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 BTBD16Q32M84 506 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 ZNF468Q5VIY5 522 aaPredicted RBP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 ICE2Q659A1 982 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 H3F3CQ6NXT2 135 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 XKRXQ6PP77 449 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 CPEB2Q7Z5Q1 589 aaKnown RBP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 PPHLN1Q8NEY8 458 aaKnown RBP11.95□□□□□ -0.5
CSHL1-201ENST00000259003 GIMAP7Q8NHV1 300 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 LPGAT1Q92604 370 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 GPR137Q96N19 417 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 PANX3Q96QZ0 392 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 RBCK1Q9BYM8 510 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 TRIM5Q9C035 493 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 DRC3Q9H069 523 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 C14orf105Q9NVL8 296 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 SYBUQ9NX95 663 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 ANAPC5Q9UJX4 755 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 CDC14AQ9UNH5 594 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 MEMO1Q9Y316 297 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 CAPN6Q9Y6Q1 641 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 ARHGAP21Q5T5U3 1957 aa11.95□□□□□ -0.5
CSHL1-201ENST00000259003 NIPBLQ6KC79 2804 aaeCLIP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ERI2A8K979 691 aaKnown RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 E7EVH7 732 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 F8W8V4 182 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 H7BY64 318 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 SGK494L7N484 410 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 MYO1CO00159 1063 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ADAM10O14672 748 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 PSIP1O75475 530 aaKnown RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 SLC16A8O95907 504 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ESRRAP11474 423 aaPredicted RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 IL1RNP18510 177 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 MGAT1P26572 445 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 TERF1P54274 439 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 PNLIPRP1P54315 467 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 EMP3P54852 163 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 PRDX1Q06830 199 aaKnown RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 MINDY4Q4G0A6 757 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 AARS2Q5JTZ9 985 aaKnown RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 PCID2Q5JVF3 399 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ACER2Q5QJU3 275 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 MFSD4BQ5TF39 518 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 Q6ZPB1 254 aaPredicted RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 GALNTL5Q7Z4T8 443 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 VN1R4Q7Z5H5 301 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ADCK2Q7Z695 626 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ANKRD37Q7Z713 158 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 SPPL2CQ8IUH8 684 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 SIAH3Q8IW03 269 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 LRRC56Q8IYG6 542 aaPredicted RBP11.94□□□□□ -0.5
CSHL1-201ENST00000259003 OR51Q1Q8NH59 317 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 SUN3Q8TAQ9 357 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 GSDMBQ8TAX9 411 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 ZNF480Q8WV37 535 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 SMPDL3AQ92484 453 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 TSLPQ969D9 159 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 MVB12AQ96EY5 273 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 FRMD6Q96NE9 622 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 PRAP1Q96NZ9 151 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 DESI2Q9BSY9 194 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 TUBB6Q9BUF5 446 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 NEU2Q9Y3R4 380 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 HRH3Q9Y5N1 445 aa11.94□□□□□ -0.5
CSHL1-201ENST00000259003 VPS26AO75436 327 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 CDC123O75794 336 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-201ENST00000259003 VAPBO95292 243 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 CLDN14O95500 239 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 GAS8O95995 478 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 B3GALT4O96024 378 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 CCNFP41002 786 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 ALDH6A1Q02252 535 aaKnown RBP11.93□□□□□ -0.5
CSHL1-201ENST00000259003 RBPJQ06330 500 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 CUL1Q13616 776 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 SIX1Q15475 284 aaPredicted RBP11.93□□□□□ -0.5
CSHL1-201ENST00000259003 OR1C1Q15619 314 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 ANKRD20A4Q4UJ75 823 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 GARNL3Q5VVW2 1013 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 PLAG1Q6DJT9 500 aa11.93□□□□□ -0.5
CSHL1-201ENST00000259003 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms