RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 FRG2BQ96QU4 278 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 FERD3LQ96RJ6 166 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 TCEAL2Q9H3H9 227 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-201ENST00000258962 ELOVL6Q9H5J4 265 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 NLGN3Q9NZ94 848 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 SCHIP1Q9P0W5 487 aaPredicted RBP16.82■□□□□ 0.28
SRSF1-201ENST00000258962 SPATA7Q9P0W8 599 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 DOLKQ9UPQ8 538 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 KCNE2Q9Y6J6 123 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 DGKBQ9Y6T7 804 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 CACNA1AO00555 2505 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 DCHS1Q96JQ0 3298 aa16.82■□□□□ 0.28
SRSF1-201ENST00000258962 MED19A0JLT2 244 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 SERTM1A2A2V5 107 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 OR52A4PA6NMU1 304 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 PDZK1P1A8MUH7 402 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 TRIM38O00635 465 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 FBP2O00757 339 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 AIM2O14862 343 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 EML2O95834 649 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 ANXA6P08133 673 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 ADRB1P08588 477 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 GNAZP19086 355 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 AK4P27144 223 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 PGM1P36871 562 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 HNF4AP41235 474 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 ZFP36L2P47974 494 aaKnown RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 NUDT2P50583 147 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 CTBSQ01459 385 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 C1orf61Q13536 156 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 TSTA3Q13630 321 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 ARHGAP19Q14CB8 494 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 CYP2A13Q16696 494 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 PDCD4Q53EL6 469 aaKnown RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 FBXW10Q5XX13 1052 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 TMPRSS11BQ86T26 416 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 C2orf73Q8N5S3 287 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 CCL4L1Q8NHW4 92 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 WDR20Q8TBZ3 569 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 WDR34Q96EX3 536 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 TEX37Q96LM6 180 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 CAAP1Q9H8G2 361 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 IMP3Q9NV31 184 aaKnown RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 TBC1D29Q9UFV1 150 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 DYRK1BQ9Y463 629 aa16.81■□□□□ 0.28
SRSF1-201ENST00000258962 ARID1BQ8NFD5 2236 aaPredicted RBP16.81■□□□□ 0.28
SRSF1-201ENST00000258962 H0YIV9 168 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SIGLEC6O43699 453 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SNRPB2P08579 225 aaKnown RBP16.8■□□□□ 0.28
SRSF1-201ENST00000258962 FTH1P19P0C7X4 201 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SLC2A4P14672 509 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 RPL38P63173 70 aaKnown RBP16.8■□□□□ 0.28
SRSF1-201ENST00000258962 RPE65Q16518 533 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 IMPG1Q17R60 797 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SMU1Q2TAY7 513 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 CCDC157Q569K6 752 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 CATSPEREQ5SY80 951 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 PRAMEF13Q5VWM6 474 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 ZFAND4Q86XD8 727 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SDR16C5Q8N3Y7 309 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 RNF175Q8N4F7 328 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 CLPTM1LQ96KA5 538 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 NPAS2Q99743 824 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 LRRC61Q9BV99 259 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 TMEM168Q9H0V1 697 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SLC52A3Q9NQ40 469 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 EVA1BQ9NVM1 165 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 POLR3HQ9Y535 204 aaPredicted RBP16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SEC23IPQ9Y6Y8 1000 aaKnown RBP16.8■□□□□ 0.28
SRSF1-201ENST00000258962 A0A088AWK7 358 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 PRAMEF33A0A0G2JMD5 474 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 C9JVG2 144 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 NPIPB8E9PQR5 432 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 LMO7DNF2Z398 122 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 MTHFD1P11586 935 aaKnown RBP16.8■□□□□ 0.28
SRSF1-201ENST00000258962 CKMT2P17540 419 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 PRPH2P23942 346 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 CCND1P24385 295 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 HSD17B2P37059 387 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 UFM1P61960 85 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 DAB2P98082 770 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 LRP8Q14114 963 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 KIAA0040Q15053 153 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 RPS6KA2Q15349 733 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 TCEA2Q15560 299 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 DEFB133Q30KQ1 61 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 WASHC2DQ5SRD0 308 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 IL23RQ5VWK5 629 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 ATG9BQ674R7 924 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 REP15Q6BDI9 236 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 LCTLQ6UWM7 567 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 ABRAXAS1Q6UWZ7 409 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 DSELQ8IZU8 1212 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 KYQ8NBH2 561 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 THTPAQ9BU02 230 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 SLC25A23Q9BV35 468 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 ACTL8Q9H568 366 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 LRTM1Q9HBL6 345 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 C1orf109Q9NX04 203 aa16.8■□□□□ 0.28
SRSF1-201ENST00000258962 NOP53Q9NZM5 478 aaKnown RBP16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms