RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 BORCS5Q969J3 196 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 OR4K3Q96R72 315 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 REXO4Q9GZR2 422 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 ING2Q9H160 280 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 SLC25A37Q9NYZ2 338 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 CARNS1A5YM72 827 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 NUAK1O60285 661 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 ADAM23O75077 832 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 PRKD3O94806 890 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 PTGER1P34995 402 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 GJA4P35212 333 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 ILF2Q12905 390 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 DMC1Q14565 340 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 ZNF829Q3KNS6 432 aaPredicted RBP14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 NOXRED1Q6NXP6 359 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 PARM1Q6UWI2 310 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 TNIP2Q8NFZ5 429 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 FGF14Q92915 247 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 MUS81Q96NY9 551 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 MACROD1Q9BQ69 325 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 XKR8Q9H6D3 395 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 ARMC1Q9NVT9 282 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 THG1LQ9NWX6 298 aaKnown RBP14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 KCNK6Q9Y257 313 aa14.15□□□□□ -0.14
TRAFD1-201ENST00000257604 MGAT4DA6NG13 374 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 AGAP14A8MT82 685 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 RTCAO00442 366 aaKnown RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 ACOX3O15254 700 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 FKBP9O95302 570 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 LDLRP01130 860 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TBPL1P62380 186 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 MC1RQ01726 317 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CHRNB3Q05901 458 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 PWP1Q13610 501 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 KRT33BQ14525 404 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 ELAVL3Q14576 367 aaKnown RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 FKBP9P1Q75LS8 142 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 HDDC3Q8N4P3 179 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 OR5AK3PQ8NH89 298 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 OR14C36Q8NHC7 312 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CENPNQ96H22 339 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TPD52L3Q96J77 140 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 NTMT1Q9BV86 223 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TMEM121BQ9BXQ6 578 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 IFT80Q9P2H3 777 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 PPT2Q9UMR5 302 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CCL27Q9Y4X3 112 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 AREL1O15033 823 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SH3BP5O60239 455 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 ANXA4P09525 319 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 ACP5P13686 325 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CD9P21926 228 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 PSMB5P28074 263 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 IMPA1P29218 277 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 ALDH9A1P49189 494 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CCT8P50990 548 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SLC14A1Q13336 389 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SLBPQ14493 270 aaKnown RBP eCLIP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CYBRD1Q53TN4 286 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 NCCRP1Q6ZVX7 275 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 DPPA4Q7L190 304 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 ZNF480Q8WV37 535 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 DTD2Q96FN9 168 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 FAM129BQ96TA1 746 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 C9orf16Q9BUW7 83 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 HEBP1Q9NRV9 189 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 IMP3Q9NV31 184 aaKnown RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 KCNE2Q9Y6J6 123 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 OBSL1O75147 1896 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 NINQ8N4C6 2090 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 NOL3O60936 208 aaKnown RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CBFA2T3O75081 653 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CBSLP0DN79 551 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CD72P21854 359 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CBSP35520 551 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 P2RY2P41231 377 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 RPS9P46781 194 aaKnown RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 BNIP2Q12982 314 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 DNASE1L3Q13609 305 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 PLEKHS1Q5SXH7 462 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SPESP1Q6UW49 350 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 VITQ6UXI7 678 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 FAM83HQ6ZRV2 1179 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TECPR1Q7Z6L1 1165 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TMCO5AQ8N6Q1 288 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 HUS1BQ8NHY5 278 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 MAL2Q969L2 176 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SMURF2Q9HAU4 748 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TBCCD1Q9NVR7 557 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SMPD3Q9NY59 655 aaPredicted RBP14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 C5AR2Q9P296 337 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 VPS29Q9UBQ0 182 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 SLC23A2Q9UGH3 650 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 TRPS1Q9UHF7 1281 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 CA5BQ9Y2D0 317 aa14.14□□□□□ -0.15
TRAFD1-201ENST00000257604 PRAMEF33A0A0G2JMD5 474 aa14.13□□□□□ -0.15
TRAFD1-201ENST00000257604 TMEM247A6NEH6 219 aa14.13□□□□□ -0.15
TRAFD1-201ENST00000257604 TMEM221A6NGB7 291 aa14.13□□□□□ -0.15
TRAFD1-201ENST00000257604 ANKRD28O15084 1053 aa14.13□□□□□ -0.15
TRAFD1-201ENST00000257604 SERPINB7O75635 380 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms