RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 IQCHQ86VS3 1027 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RAB43Q86YS6 212 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RASGRP3Q8IV61 690 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RHEBL1Q8TAI7 183 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 SPATA9Q9BWV2 254 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 TCF7L1Q9HCS4 588 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 SDHAF3Q9NRP4 125 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RGS17Q9UGC6 210 aaPredicted RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RNF11Q9Y3C5 154 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 SCDO00767 359 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 G6PDP11413 515 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 GDF5P43026 501 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 RPS13P62277 151 aaKnown RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 LIPJQ5W064 366 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 USP43Q70EL4 1123 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 KLHL36Q8N4N3 616 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 CANT1Q8WVQ1 401 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 KBTBD7Q8WVZ9 684 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 MOAP1Q96BY2 351 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 ZSWIM3Q96MP5 696 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 MGME1Q9BQP7 344 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 TPT1P8Q9HAU6 139 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 TOPAZ1Q8N9V7 1692 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 BCHEP06276 602 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 XRCC1P18887 633 aaPredicted RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 STARP49675 285 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 VBP1P61758 197 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 CRTC2Q53ET0 693 aaPredicted RBP18.42■□□□□ 0.54
PTPRE-201ENST00000254667 AKAP14Q86UN6 197 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 PLA2G15Q8NCC3 412 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 OR5AK3PQ8NH89 298 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 CRELD1Q96HD1 420 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 HIST1H2AAQ96QV6 131 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 MAPKAP1Q9BPZ7 522 aa18.42■□□□□ 0.54
PTPRE-201ENST00000254667 AKAP8O43823 692 aaKnown RBP18.41■□□□□ 0.54
PTPRE-201ENST00000254667 GBX2P52951 348 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-201ENST00000254667 DECR1Q16698 335 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 DNM1P34Q6PK57 102 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 WDTC1Q8N5D0 677 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 FATE1Q969F0 183 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 YIPF4Q9BSR8 244 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 ACTL8Q9H568 366 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 AREL1O15033 823 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 KLK3P07288 261 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-201ENST00000254667 HNF1BP35680 557 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 GSTM4Q03013 218 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF763Q0D2J5 394 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 ST3GAL3Q11203 375 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 CEACAM20Q6UY09 585 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 CYS1Q717R9 158 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 TMCO2Q7Z6W1 182 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-201ENST00000254667 CHST4Q8NCG5 386 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 LRCH3Q96II8 777 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 PHF12Q96QT6 1004 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 TBC1D17Q9HA65 648 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 C19orf25Q9UFG5 118 aaPredicted RBP18.41■□□□□ 0.54
PTPRE-201ENST00000254667 ADAMTS5Q9UNA0 930 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 E7ENX8 843 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 PROZP22891 400 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 LMX1AQ8TE12 382 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 MRGPRX2Q96LB1 330 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 CLEC4AQ9UMR7 237 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 FAM25EA8MYX2 175 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 FAM72CH0Y354 149 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 PDX1P52945 283 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 TLR1Q15399 786 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 FAM72AQ5TYM5 149 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 FAM72DQ6L9T8 149 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 FAM72BQ86X60 149 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 SUN3Q8TAQ9 357 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 GLYATL1Q969I3 302 aa18.41■□□□□ 0.54
PTPRE-201ENST00000254667 E7ESA3 106 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 TLR4O00206 839 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 CSF2RAP15509 400 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 OLFML2AQ68BL7 652 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 TCEAL6Q6IPX3 200 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 WDR6Q9NNW5 1121 aaKnown RBP18.4■□□□□ 0.54
PTPRE-201ENST00000254667 SERTAD3Q9UJW9 196 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 ZNF726A6NNF4 738 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 JUNP05412 331 aaKnown RBP18.4■□□□□ 0.54
PTPRE-201ENST00000254667 RNF220Q5VTB9 566 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 OR6K6Q8NGW6 343 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 PYURFQ96I23 114 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 POLR2J2Q9GZM3 115 aaKnown RBP18.4■□□□□ 0.54
PTPRE-201ENST00000254667 CTPS2Q9NRF8 586 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 VEGFDO43915 354 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 BEST1O76090 585 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 C8BP07358 591 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 FPR1P21462 350 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 SMSP52788 366 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 E2F2Q14209 437 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 ARHGAP40Q5TG30 622 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 IGSF8Q969P0 613 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 OR2M4Q96R27 311 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 LGR4Q9BXB1 951 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 UPB1Q9UBR1 384 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 CLDN25C9JDP6 229 aa18.4■□□□□ 0.54
PTPRE-201ENST00000254667 TFECO14948 347 aaPredicted RBP18.4■□□□□ 0.54
PTPRE-201ENST00000254667 F7P08709 466 aaPredicted RBP18.4■□□□□ 0.54
PTPRE-201ENST00000254667 CYBAP13498 195 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 80.3 ms