RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 C21orf58P58505 322 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 TAP2Q03519 686 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 CHIT1Q13231 466 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ABRAXAS2Q15018 415 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 SNCBQ16143 134 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 AP5B1Q2VPB7 878 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 PGM2L1Q6PCE3 622 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 DOK6Q6PKX4 331 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 BNC2Q6ZN30 1099 aaPredicted RBP12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ABI3BPQ7Z7G0 1075 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ULK2Q8IYT8 1036 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 AVL9Q8NBF6 648 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 TMEM145Q8NBT3 493 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 NAT14Q8WUY8 206 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 SELENOMQ8WWX9 145 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 SMPDL3AQ92484 453 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 DCLRE1BQ9H816 532 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 NT5DC2Q9H857 520 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 PELI2Q9HAT8 420 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 LRTM1Q9HBL6 345 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 SIRT5Q9NXA8 310 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ZMIZ1Q9ULJ6 1067 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 RNF11Q9Y3C5 154 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 OR1A2Q9Y585 309 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 COLEC10Q9Y6Z7 277 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ZFHX4Q86UP3 3567 aa12.74□□□□□ -0.37
SLIRP-201ENST00000238688 ZFYVE26Q68DK2 2539 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 LOC100653049A0A140TA62 436 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 A0A1W2PP18 115 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 TAF4O00268 1085 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 CFLARO15519 480 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 PEX11AO75192 247 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 EEDO75530 441 aaKnown RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 KRT34O76011 436 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 FKBP9O95302 570 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 CD38P28907 300 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 BDKRB1P46663 353 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 THOP1P52888 689 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 MTTPP55157 894 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 TBPL1P62380 186 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 GRB7Q14451 532 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 ZXDCQ2QGD7 858 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 C18orf21Q32NC0 220 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 SPIN4Q56A73 249 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 FBXO48Q5FWF7 155 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 XKR6Q5GH73 641 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 MED27Q6P2C8 311 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 ABRAXAS1Q6UWZ7 409 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 SLCO4C1Q6ZQN7 724 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 FAM83HQ6ZRV2 1179 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 IQCHQ86VS3 1027 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 SPNS2Q8IVW8 549 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 LAS2Q8IYD9 372 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 LRRC56Q8IYG6 542 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 DEFB107AQ8IZN7 70 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 DSELQ8IZU8 1212 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 KRT78Q8N1N4 520 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 SFRP1Q8N474 314 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 DPP10Q8N608 796 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 LILRA3Q8N6C8 439 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 POU5F2Q8N7G0 328 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 RHBDD1Q8TEB9 315 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 POP5Q969H6 163 aaKnown RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 FCRL1Q96LA6 429 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 CDK15Q96Q40 435 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 THTPAQ9BU02 230 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 ATG10Q9H0Y0 220 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 MUC13Q9H3R2 512 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 WDR41Q9HAD4 459 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 SPAG4Q9NPE6 437 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 INTS7Q9NVH2 962 aaKnown RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 CCDC167Q9P0B6 97 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 LEF1Q9UJU2 399 aaPredicted RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 SUFUQ9UMX1 484 aa12.73□□□□□ -0.37
SLIRP-201ENST00000238688 WBP11Q9Y2W2 641 aaKnown RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 URB1O60287 2271 aaKnown RBP12.73□□□□□ -0.37
SLIRP-201ENST00000238688 ASXL3Q9C0F0 2248 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 A0A088AWK7 358 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 OR5K4A6NMS3 321 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 MRASO14807 208 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 AIM2O14862 343 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 SLC31A1O15431 190 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 FKBP6O75344 327 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 MYO1DO94832 1006 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 ATP6V1G2O95670 118 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 IL6P05231 212 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 C1GALT1C1LP0DN25 315 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 NPPBP16860 134 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 GSTM5P46439 218 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 CPA2P48052 419 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 CCT8P50990 548 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 RAB28P51157 221 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 BLKP51451 505 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 NXPH1P58417 271 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 ACTR3P61158 418 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 ABATP80404 500 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 LRRC74AQ0VAA2 488 aa12.72□□□□□ -0.37
SLIRP-201ENST00000238688 TBL3Q12788 808 aaKnown RBP12.72□□□□□ -0.37
SLIRP-201ENST00000238688 CPSF6Q16630 551 aaKnown RBP eCLIP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms