RNA–Protein interactions for RNA: ENST00000233072.9

CPS1-201, Transcript of carbamoyl-phosphate synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPS1, Length 5,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-201ENST00000233072 KXD1Q9BQD3 176 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 BTBD1Q9H0C5 482 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 TBC1D17Q9HA65 648 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ABCB9Q9NP78 766 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 TDP1Q9NUW8 608 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 PRODH2Q9UF12 536 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 GLS2Q9UI32 602 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 KLHL21Q9UJP4 597 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 DKKL1Q9UK85 242 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 CCDC85CA6NKD9 419 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 AOC2O75106 756 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 PLGP00747 810 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 NCK1P16333 377 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 HK1P19367 917 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 F8A1P23610 371 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 BMP8BP34820 402 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 WASP42768 502 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 AQP4P55087 323 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 SLC18A2Q05940 514 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 COLEC12Q5KU26 742 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ZNF782Q6ZMW2 699 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 BMP8AQ7Z5Y6 402 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ZC3H3Q8IXZ2 948 aaKnown RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 KIAA1191Q96A73 305 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 PIWIL1Q96J94 861 aaKnown RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 CD244Q9BZW8 370 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ELAC1Q9H777 363 aaKnown RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 C12orf4Q9NQ89 552 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ACTR3BQ9P1U1 418 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 CMAHPQ9Y471 501 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 NOX1Q9Y5S8 564 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 CLIC1O00299 241 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 WNT7AO00755 349 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 HNRNPA1P09651 372 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPS1-201ENST00000233072 MYCLP1P12525 358 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 ATF4P18848 351 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 AOC1P19801 751 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 CSTF2P33240 577 aaKnown RBP eCLIP7.02□□□□□ -1.29
CPS1-201ENST00000233072 ABHD18Q0P651 414 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 RNASE12Q5GAN4 147 aaKnown RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 PRAMEF17Q5VTA0 474 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 NRROSQ86YC3 692 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 TRAM1L1Q8N609 369 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ZSCAN4Q8NAM6 433 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 ATP6V1C2Q8NEY4 427 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 OR4K17Q8NGC6 315 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 OR8J3Q8NGG0 315 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 OR9A1PQ8NGU1 263 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 HTRA1Q92743 480 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 COQ8BQ96D53 544 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 CDKN2AIPNLQ96HQ2 116 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ADAD1Q96M93 576 aaKnown RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 STRADBQ9C0K7 418 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 TRNAU1APQ9NX07 287 aaKnown RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 A0A1W2PRQ8 180 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 LCHNA4D1U4 455 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 C2orf71A6NGG8 1288 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 BCAS2O75934 225 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 AK1P00568 194 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 SOD2P04179 222 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 HLA-DPB1P04440 258 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 SLC2A2P11168 524 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 OXTRP30559 389 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 GRIA1P42261 906 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 MTPNP58546 118 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ASTE1Q2TB18 679 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 C1orf189Q5VU69 101 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 GRHL2Q6ISB3 625 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ZDHHC24Q6UX98 284 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 RNF19BQ6ZMZ0 732 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ZNF627Q7L945 461 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ARMC10Q8N2F6 343 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 INO80EQ8NBZ0 244 aaPredicted RBP7.02□□□□□ -1.29
CPS1-201ENST00000233072 COL21A1Q96P44 957 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 PTPN18Q99952 460 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 ORAI3Q9BRQ5 295 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 TMEM9Q9P0T7 183 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 CYTH4Q9UIA0 394 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 SNED1Q8TER0 1413 aa7.02□□□□□ -1.29
CPS1-201ENST00000233072 TRBC2A0A5B9 178 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 FAM170BA6NMN3 283 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 PEX12O00623 359 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 PHYHO14832 338 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 MID1O15344 667 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 EPOP01588 193 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 IL3P08700 152 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 MSL3P1P0C860 447 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 NRIP1P48552 1158 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 GJA9P57773 515 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 OCLNQ16625 522 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 SYT16Q17RD7 645 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 PLEKHN1Q494U1 663 aaPredicted RBP7.01□□□□□ -1.29
CPS1-201ENST00000233072 NPAS3Q8IXF0 933 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 ZNF440Q8IYI8 595 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 ZNF676Q8N7Q3 588 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 CREB3L1Q96BA8 519 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 NELFAQ9H3P2 528 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 PHF24Q9UPV7 400 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 OR5K4A6NMS3 321 aa7.01□□□□□ -1.29
CPS1-201ENST00000233072 TTLL8A6PVC2 850 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms