RNA–Protein interactions for RNA: ENST00000224807.9

SFXN3-201, Transcript of sideroflexin 3, humanhuman

TSL 5 BASIC

Gene SFXN3, Length 3,089 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-201ENST00000224807 DENND1CQ8IV53 801 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CHPFQ8IZ52 775 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 TMEM86AQ8N2M4 240 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 DIRAS2Q96HU8 199 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CCNB1IP1Q9NPC3 277 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CCDC177Q9NQR7 707 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CLEC2DQ9UHP7 191 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 TBC1D24Q9ULP9 559 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ERN1O75460 977 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 PSIP1O75475 530 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 IL6P05231 212 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 PSKH1P11801 424 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 KIR3DL1P43629 444 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 GNG2P59768 71 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 DBPQ10586 325 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SERINC3Q13530 473 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 DSC3Q14574 896 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CDK10Q15131 360 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SPATS1Q496A3 300 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 DUSP28Q4G0W2 176 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 PDZK1Q5T2W1 519 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 PAQR6Q6TCH4 344 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 EIF3MQ7L2H7 374 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SZRD1Q7Z422 152 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 AADATQ8N5Z0 425 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CELF5Q8N6W0 485 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ZFP41Q8N8Y5 198 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 B3GNT7Q8NFL0 401 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 MYDGFQ969H8 173 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 TP53INP1Q96A56 240 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 VPS35Q96QK1 796 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 UBA2Q9UBT2 640 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 FCF1Q9Y324 198 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SPEF1Q9Y4P9 236 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 PEX16Q9Y5Y5 336 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 POLR2AP24928 1970 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 A0A1B0GVC2 190 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 A6NIN4 97 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 H3BN98 237 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SAP18O00422 153 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 MANBAO00462 879 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 TAPBPO15533 448 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SEMA3DO95025 777 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 TTPAP49638 278 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 CDC20Q12834 499 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 RNASE12Q5GAN4 147 aaKnown RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 DGKKQ5KSL6 1271 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ARTNQ5T4W7 220 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 C10orf62Q5T681 223 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 LIPKQ5VXJ0 399 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ADNP2Q6IQ32 1131 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 SERPINA9Q86WD7 417 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 UMODL1-AS1Q8N2C9 162 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 OR10G2Q8NGC3 310 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 OR4K1Q8NGD4 311 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 PHF21AQ96BD5 680 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ST6GAL2Q96JF0 529 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 TCF25Q9BQ70 676 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ABHD16BQ9H3Z7 469 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 IL1RAPQ9NPH3 570 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 GKN1Q9NS71 199 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 ZFP37Q9Y6Q3 630 aaPredicted RBP13.89□□□□□ -0.19
SFXN3-201ENST00000224807 MAU2Q9Y6X3 613 aa13.89□□□□□ -0.19
SFXN3-201ENST00000224807 A0A0G2JLL6 359 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 A8MUA0 341 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PRAMEF1O95521 474 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 TSPAN19P0C672 248 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 NAT1P18440 290 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 SBSNQ6UWP8 590 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 CXCL17Q6UXB2 119 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PRRT2Q7Z6L0 340 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 TAGAPQ8N103 731 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 GHDCQ8N2G8 530 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 ENKURQ8TC29 256 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 CHAC2Q8WUX2 184 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PPP1R2P1Q96PQ5 205 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 COMMD3Q9UBI1 195 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 CRLS1Q9UJA2 301 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 NDRG4Q9ULP0 352 aaKnown RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PTNP21246 168 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 RPS19P39019 145 aaKnown RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 HNF4AP41235 474 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 IL12RB1P42701 662 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 ZNF45Q02386 682 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 DOC2BQ14184 412 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 STARD3Q14849 445 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 CLPPQ16740 277 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 TYSND1Q2T9J0 566 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 CAPN13Q6MZZ7 669 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 TMIGD1Q6UXZ0 262 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PTCHD4Q6ZW05 846 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 SLC46A3Q7Z3Q1 461 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 LGI4Q8N135 537 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 PIK3R3Q92569 461 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 CPPED1Q9BRF8 314 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 FAM126AQ9BYI3 521 aaPredicted RBP13.88□□□□□ -0.19
SFXN3-201ENST00000224807 UCK2Q9BZX2 261 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 TM9SF3Q9HD45 589 aa13.88□□□□□ -0.19
SFXN3-201ENST00000224807 NLE1Q9NVX2 485 aaPredicted RBP13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms