RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 LARP7Q4G0J3 582 aaKnown RBP eCLIP22.63■■□□□ 1.21
HOMER3-201ENST00000221222 TMEM164Q5U3C3 297 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 ATG9BQ674R7 924 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 TMPRSS11BQ86T26 416 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 PPP1R3BQ86XI6 285 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 MCATQ8IVS2 390 aaKnown RBP22.63■■□□□ 1.21
HOMER3-201ENST00000221222 TEX9Q8N6V9 391 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 USP7Q93009 1102 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 PMEPA1Q969W9 287 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 TLCD1Q96CP7 247 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 WDR34Q96EX3 536 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 ZNF285Q96NJ3 590 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 FCRL4Q96PJ5 515 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 CTRCQ99895 268 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 SARGQ9BW04 601 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 ERVK-6Q9BXR3 956 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 SLC17A7Q9P2U7 560 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 COPG2Q9UBF2 871 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 PCTPQ9UKL6 214 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 B3GALT1Q9Y5Z6 326 aa22.63■■□□□ 1.21
HOMER3-201ENST00000221222 LAMA5O15230 3695 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 CLGNO14967 610 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 BRINP1O60477 761 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 SASH3O75995 380 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 C1GALT1C1LP0DN25 315 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 CPA3P15088 417 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 GRK3P35626 688 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 AGBL2Q5U5Z8 902 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 OR1L3Q8NH93 324 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 N4BP2L2Q92802 583 aaPredicted RBP22.62■■□□□ 1.21
HOMER3-201ENST00000221222 FAM111AQ96PZ2 611 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 OR2A5Q96R48 311 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 SH3GL2Q99962 352 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 SERTAD3Q9UJW9 196 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 AK5Q9Y6K8 562 aa22.62■■□□□ 1.21
HOMER3-201ENST00000221222 SPTBP11277 2137 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 KCNE1BA0A087WTH5 132 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 A0A0J9YVX5 310 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 PRPF4O43172 522 aaKnown RBP eCLIP22.61■■□□□ 1.21
HOMER3-201ENST00000221222 SRPX2O60687 465 aaPredicted RBP22.61■■□□□ 1.21
HOMER3-201ENST00000221222 PRAMEF4O60810 478 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 KATNA1O75449 491 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 IMPDH1P20839 514 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 CASP2P42575 452 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 ITGA1P56199 1179 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 RPS15AP62244 130 aaKnown RBP22.61■■□□□ 1.21
HOMER3-201ENST00000221222 GTF2H2Q13888 395 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 TBCCQ15814 346 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 PRAMEF9Q5VWM5 478 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 GTF2H2CQ6P1K8 395 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 GOLGA7Q7Z5G4 137 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 CCDC63Q8NA47 563 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 ARMC2Q8NEN0 867 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 L3HYPDHQ96EM0 354 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 TMEM237Q96Q45 408 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 SELENOSQ9BQE4 189 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 SYNPO2LQ9H987 977 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 ZNF446Q9NWS9 450 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 ANGPTL3Q9Y5C1 460 aa22.61■■□□□ 1.21
HOMER3-201ENST00000221222 CELSR3Q9NYQ7 3312 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 TRBC2A0A5B9 178 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 ERVPABLB-1P60509 514 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 REEP5Q00765 189 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 ZNF678Q5SXM1 525 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 FRMPD2BQ6IN97 320 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 ZNF483Q8TF39 744 aaPredicted RBP22.6■■□□□ 1.21
HOMER3-201ENST00000221222 THAP11Q96EK4 314 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 AIF1LQ9BQI0 150 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 THSD1Q9NS62 852 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 OXSMQ9NWU1 459 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 GEMIN8Q9NWZ8 242 aaKnown RBP22.6■■□□□ 1.21
HOMER3-201ENST00000221222 ACSL6Q9UKU0 697 aa22.6■■□□□ 1.21
HOMER3-201ENST00000221222 FEZF1A0PJY2 475 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 TM9SF1O15321 606 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 OR2B3O76000 313 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 WFS1O76024 890 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 CXCR2P25025 360 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 VARSP26640 1264 aaKnown RBP22.59■■□□□ 1.21
HOMER3-201ENST00000221222 SLC5A2P31639 672 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 ETV4P43268 484 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 DNAJB13P59910 316 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 MEF2AQ02078 507 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-201ENST00000221222 IRF8Q02556 426 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 PCLAFQ15004 111 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 XKR6Q5GH73 641 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 TCTE1Q5JU00 501 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 PWWP2BQ6NUJ5 590 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 PLD3Q8IV08 490 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 GPR135Q8IZ08 494 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 ARL8AQ96BM9 186 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 PTCD3Q96EY7 689 aaKnown RBP22.59■■□□□ 1.21
HOMER3-201ENST00000221222 ZNF578Q96N58 590 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-201ENST00000221222 DCBLD2Q96PD2 775 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 PITHD1Q9GZP4 211 aaPredicted RBP22.59■■□□□ 1.21
HOMER3-201ENST00000221222 SPNS1Q9H2V7 528 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 IPPKQ9H8X2 491 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 FOXJ2Q9P0K8 574 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 DKK4Q9UBT3 224 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 PCDHGA4Q9Y5G9 962 aa22.59■■□□□ 1.21
HOMER3-201ENST00000221222 LOC105369274A0A096LPK9 316 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms