RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 AAR2Q9Y312 384 aaKnown RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 PCDHGA9Q9Y5G4 932 aaKnown RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 ADM5C9JUS6 153 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 DPYSL4O14531 572 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 ITGAMP11215 1152 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 F8A1P23610 371 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 VSX2P58304 361 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 NIPA1Q7RTP0 329 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 KANSL1Q7Z3B3 1105 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 PGBD5Q8N414 524 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 OR2T11Q8NH01 316 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 EDEM1Q92611 657 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 RHBDF1Q96CC6 855 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF419Q96HQ0 510 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 TINF2Q9BSI4 451 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 RANBP3Q9H6Z4 567 aaPredicted RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 EIF2B4Q9UI10 523 aaKnown RBP14.23□□□□□ -0.13
PTPRA-201ENST00000216877 TRHDEQ9UKU6 1024 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 SSR3Q9UNL2 185 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 MAPRE3Q9UPY8 281 aa14.23□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF806P0C7X5 589 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 DNAJB2P25686 324 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 ACVR2AP27037 513 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 NDUFV1P49821 464 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 TNK1Q13470 666 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 LARS2Q15031 903 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 ALFQ53S48 1182 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 DDI2Q5TDH0 399 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 LIPKQ5VXJ0 399 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 OVOS1Q6IE37 1185 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 ZPBP2Q6X784 338 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 CTU1Q7Z7A3 348 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 ZFAND4Q86XD8 727 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 C2CD4AQ8NCU7 369 aaPredicted RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 BEST4Q8NFU0 473 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 SLC16A10Q8TF71 515 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 SPRTNQ9H040 489 aaPredicted RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 NDRG2Q9UN36 371 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 CDK1P06493 297 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 TGFB3P10600 412 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF30P17039 623 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 NPR3P17342 541 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 HTR6P50406 440 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 PTPRRQ15256 657 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 TBCEQ15813 527 aaPredicted RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 PHYKPLQ8IUZ5 450 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 ATPAF2Q8N5M1 289 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 BCO2Q9BYV7 579 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 MGAT4BQ9UQ53 548 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 KCTD3Q9Y597 815 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 PRSS44E7EML9 344 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 SLC30A4O14863 429 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 PCDH17O14917 1159 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 DNAJA1P31689 397 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 EFNA5P52803 228 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 LAMTOR4Q0VGL1 99 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 COQ5Q5HYK3 327 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 IER5Q5VY09 327 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 C22orf42Q6IC83 251 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 SHQ1Q6PI26 577 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 GPRIN3Q6ZVF9 776 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 CCDC71Q8IV32 467 aaPredicted RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 GHDCQ8N2G8 530 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 C9orf62Q8N4C0 152 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 KRTCAP2Q8N6L1 136 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 OR8K5Q8NH50 307 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 SLC2A14Q8TDB8 520 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 BLOC1S5Q8TDH9 187 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 GTPBP3Q969Y2 492 aaKnown RBP14.22□□□□□ -0.13
PTPRA-201ENST00000216877 SLC6A17Q9H1V8 727 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 PLCL2Q9UPR0 1127 aa14.22□□□□□ -0.13
PTPRA-201ENST00000216877 A0A1B0GVC2 190 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 A6NIN4 97 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 LYRM1O43325 122 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 SGTAO43765 313 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF254O75437 659 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 RAF1P04049 648 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 SUPT20HL2P0C7V6 817 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 POLR2GP62487 172 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTPRA-201ENST00000216877 HMGCS1Q01581 520 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 KEAP1Q14145 624 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 FBXO43Q4G163 708 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 KANK2Q63ZY3 851 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 RDH10Q8IZV5 341 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 ZNF548Q8NEK5 533 aaPredicted RBP14.21□□□□□ -0.13
PTPRA-201ENST00000216877 POLR2J2Q9GZM3 115 aaKnown RBP14.21□□□□□ -0.13
PTPRA-201ENST00000216877 C1orf109Q9NX04 203 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 CPA4Q9UI42 421 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 LINC00862A6NCI5 91 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 SSNA1O43805 119 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 SEC22BO75396 215 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 ANXA9O76027 345 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 FABP3P05413 133 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 HTR7P34969 479 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 RBP5P82980 135 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 USP39Q53GS9 565 aaKnown RBP14.21□□□□□ -0.13
PTPRA-201ENST00000216877 CAPN13Q6MZZ7 669 aaPredicted RBP14.21□□□□□ -0.13
PTPRA-201ENST00000216877 HASPINQ8TF76 798 aa14.21□□□□□ -0.13
PTPRA-201ENST00000216877 GPRASP2Q96D09 838 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms