RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RAP2AP10114 183 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 ABHD18Q0P651 414 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 TMEM259Q4ZIN3 620 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 CHERPQ8IWX8 916 aaKnown RBP28.61■■■□□ 2.17
PABPN1-201ENST00000216727 ST13P4Q8IZP2 240 aaPredicted RBP28.61■■■□□ 2.17
PABPN1-201ENST00000216727 CBR4Q8N4T8 237 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 LMNTD1Q8N9Z9 388 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 MIEF2Q96C03 454 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 FAM120BQ96EK7 910 aaKnown RBP28.61■■■□□ 2.17
PABPN1-201ENST00000216727 CNBD2Q96M20 576 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 RNF145Q96MT1 663 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 IL17FQ96PD4 163 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 CENPKQ9BS16 269 aa28.61■■■□□ 2.17
PABPN1-201ENST00000216727 ANHXE9PGG2 379 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 SCAMP2O15127 329 aaKnown RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 PIK3CBP42338 1070 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 TXNL4AP83876 142 aaKnown RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 SGCGQ13326 291 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 FAM98BQ52LJ0 330 aaKnown RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 THEMIS2Q5TEJ8 643 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 POP5Q969H6 163 aaKnown RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 AURKBQ96GD4 344 aaPredicted RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 UGT2B28Q9BY64 529 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 ARHGAP10A1A4S6 786 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 CXCR6O00574 342 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 RETP07949 1114 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 MYCLP1P12525 358 aaPredicted RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 GANCQ8TET4 914 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 REXO5Q96IC2 774 aaKnown RBP28.6■■■□□ 2.17
PABPN1-201ENST00000216727 TBCDQ9BTW9 1192 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 ADGRE2Q9UHX3 823 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 OAZ3Q9UMX2 235 aa28.6■■■□□ 2.17
PABPN1-201ENST00000216727 ACOX3O15254 700 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 DNTTP04053 509 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 LINGO3P0C6S8 592 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 C7P10643 843 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 CTHP32929 405 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 SF1Q15637 639 aaKnown RBP28.59■■■□□ 2.17
PABPN1-201ENST00000216727 NHSL2Q5HYW2 709 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 PANX1Q96RD7 426 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 TDRKHQ9Y2W6 561 aaKnown RBP28.59■■■□□ 2.17
PABPN1-201ENST00000216727 RASAL1O95294 804 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 CHRNB3Q05901 458 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 CYP2A13Q16696 494 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 IL17RCQ8NAC3 791 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 OR14C36Q8NHC7 312 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 CXorf40BQ96DE9 158 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 BDH2Q9BUT1 245 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 SLC17A9Q9BYT1 436 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 TRIT1Q9H3H1 467 aaKnown RBP28.59■■■□□ 2.17
PABPN1-201ENST00000216727 CLDND1Q9NY35 253 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 SPATA7Q9P0W8 599 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 PLAGL1Q9UM63 463 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 V9GYQ6 96 aa28.59■■■□□ 2.17
PABPN1-201ENST00000216727 A0A1W2PQU0 124 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 FPGTO14772 594 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 PCDH7O60245 1069 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 SLC35G4P0C7Q5 338 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 SERPINA11Q86U17 422 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 FAM129CQ86XR2 697 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 GPR156Q8NFN8 814 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 PRPF18Q99633 342 aaKnown RBP28.58■■■□□ 2.17
PABPN1-201ENST00000216727 DUSP26Q9BV47 211 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 SPNS1Q9H2V7 528 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 RMI1Q9H9A7 625 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 PRM3Q9NNZ6 103 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 ZNF639Q9UID6 485 aa28.58■■■□□ 2.17
PABPN1-201ENST00000216727 EVPLLA8MZ36 301 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 ADAM23O75077 832 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 SH3BGRLO75368 114 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 LAMP1P11279 417 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 HPCAL1P37235 193 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 PHEXP78562 749 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 CPTPQ5TA50 214 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 CARM1Q86X55 608 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 C10orf111Q8N326 155 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 CDC26Q8NHZ8 85 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 KLK6Q92876 244 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 COQ8BQ96D53 544 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 MYCBPQ99417 103 aaPredicted RBP28.57■■■□□ 2.16
PABPN1-201ENST00000216727 TIMM29Q9BSF4 260 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 MENTQ9BUN1 341 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 C1QTNF7Q9BXJ2 289 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 DOCK9Q9BZ29 2069 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 A0A1W2PQF6 199 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 GABRR3A8MPY1 467 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 PDLIM1O00151 329 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 CLOCKO15516 846 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 ARMCX6Q7L4S7 300 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 PUM2Q8TB72 1066 aaKnown RBP eCLIP28.57■■■□□ 2.167e-15■■■■□ 19.8
PABPN1-201ENST00000216727 FAM162AQ96A26 154 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 MSLNLQ96KJ4 702 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 NECTIN4Q96NY8 510 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 LIMD1Q9UGP4 676 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 BTNL2Q9UIR0 455 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 BTBD3Q9Y2F9 522 aa28.57■■■□□ 2.16
PABPN1-201ENST00000216727 RNF103-CHMP3A0A140T963 221 aa28.56■■■□□ 2.16
PABPN1-201ENST00000216727 GNG14A0A1W2PPG7 69 aa28.56■■■□□ 2.16
PABPN1-201ENST00000216727 RNGTTO60942 597 aaKnown RBP28.56■■■□□ 2.16
PABPN1-201ENST00000216727 CREG1O75629 220 aa28.56■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms