RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 FRG2BQ96QU4 278 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 CLMPQ9H6B4 373 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 TPT1P8Q9HAU6 139 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 HCFC2Q9Y5Z7 792 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 RGS5O15539 181 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 PRIM2P49643 509 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 CLCN4P51793 760 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 NTHL1P78549 312 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 PLEKHG6Q3KR16 790 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 ZNF362Q5T0B9 420 aaPredicted RBP14.6□□□□□ -0.07
EFNB1-201ENST00000204961 CPZQ66K79 652 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 GAREM2Q75VX8 874 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 P2RY8Q86VZ1 359 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 HJURPQ8NCD3 748 aaPredicted RBP14.6□□□□□ -0.07
EFNB1-201ENST00000204961 SH3YL1Q96HL8 342 aaPredicted RBP14.6□□□□□ -0.07
EFNB1-201ENST00000204961 KCNS3Q9BQ31 491 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 TCF25Q9BQ70 676 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 SERHLQ9NQF3 203 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 TUBA8Q9NY65 449 aaPredicted RBP14.6□□□□□ -0.07
EFNB1-201ENST00000204961 KIAA1522Q9P206 1035 aaPredicted RBP14.6□□□□□ -0.07
EFNB1-201ENST00000204961 POU2F3Q9UKI9 436 aa14.6□□□□□ -0.07
EFNB1-201ENST00000204961 TSPAN6O43657 245 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 FABP3P05413 133 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 EPHB3P54753 998 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 FAR1Q8WVX9 515 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 TCEAL4Q96EI5 215 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 FEVQ99581 238 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 MRPL17Q9NRX2 175 aaKnown RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 IL37Q9NZH6 218 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SNX6Q9UNH7 406 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 ATP11BQ9Y2G3 1177 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 DICER1Q9UPY3 1922 aaKnown RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 WASHC1A8K0Z3 465 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SEC14L2O76054 403 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SCELO95171 688 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SLC16A8O95907 504 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 OR56A5P0C7T3 313 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 CD22P20273 847 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 KRT20P35900 424 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 RECQLP46063 649 aaPredicted RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 DOC2AQ14183 400 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 ARSIQ5FYB1 569 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 WASH2PQ6VEQ5 465 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 CERS6Q6ZMG9 384 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SLC16A12Q6ZSM3 486 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SPATC1Q76KD6 591 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 FAM20CQ8IXL6 584 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 OR2AP1Q8NGE2 309 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 VANGL1Q8TAA9 524 aaPredicted RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 MRPS31Q92665 395 aaKnown RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 PCM1Q15154 2024 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 CLDN25C9JDP6 229 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 IGFBP1P08833 259 aaPredicted RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 STSP08842 583 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SPTBP11277 2137 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 BMP4P12644 408 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 ZNF12P17014 697 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 KDELR2P33947 212 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 TPTEP56180 551 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SPIBQ01892 262 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 MXD1Q05195 221 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 MED22Q15528 200 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 UGT8Q16880 541 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 LEXMQ3ZCV2 418 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 TRAPPC5Q8IUR0 188 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 OR8J3Q8NGG0 315 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 IGSF21Q96ID5 467 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 Q96MT0 163 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 PKP4Q99569 1192 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 SUV39H2Q9H5I1 410 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 LSM7Q9UK45 103 aaKnown RBP14.59□□□□□ -0.07
EFNB1-201ENST00000204961 PCDHGA10Q9Y5H3 936 aa14.59□□□□□ -0.07
EFNB1-201ENST00000204961 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.58□□□□□ -0.07
EFNB1-201ENST00000204961 H0YAE9 185 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 PCDHGA12O60330 932 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 SLC10A3P09131 477 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 EBLN1P0CF75 366 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 HLA-EP13747 358 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 NSG1P42857 185 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 RPS13P62277 151 aaKnown RBP14.58□□□□□ -0.07
EFNB1-201ENST00000204961 DMPKQ09013 629 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 CNTN1Q12860 1018 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 CLCA4Q14CN2 919 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 ACOX1Q15067 660 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 TNFAIP8L2Q6P589 184 aaPredicted RBP14.58□□□□□ -0.07
EFNB1-201ENST00000204961 DHRS4L2Q6PKH6 230 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 TRMT11Q7Z4G4 463 aaKnown RBP14.58□□□□□ -0.07
EFNB1-201ENST00000204961 HSD11B1LQ7Z5J1 315 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 TMEM150AQ86TG1 271 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 POC5Q8NA72 575 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 DOK4Q8TEW6 326 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 DNASE1L2Q92874 299 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 SH3GL1Q99961 368 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 MACROD1Q9BQ69 325 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 KCTD5Q9NXV2 234 aa14.58□□□□□ -0.07
EFNB1-201ENST00000204961 M0QX08 132 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 ARNTLO00327 626 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 TEX28O15482 410 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 SRCP12931 536 aa14.58□□□□□ -0.08
EFNB1-201ENST00000204961 RNF144AP50876 292 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms