RNA–Protein interactions for RNA: ENST00000200181.7

ITGB4-201, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene ITGB4, Length 5,919 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-201ENST00000200181 TRMT10BQ6PF06 316 aaKnown RBP16.73■□□□□ 0.27
ITGB4-201ENST00000200181 NFKBIDQ8NI38 313 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 ZIM2Q9NZV7 527 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 HIF3AQ9Y2N7 669 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 HSPA12AO43301 675 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 CH25HO95992 272 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 MMP3P08254 477 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 FOXN2P32314 431 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 PON3Q15166 354 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 LRRN1Q6UXK5 716 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 ABHD15Q6UXT9 468 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 HNRNPABQ99729 332 aaKnown RBP16.73■□□□□ 0.27
ITGB4-201ENST00000200181 PDZD7Q9H5P4 517 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 VNN3Q9NY84 501 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 H3BSH0 61 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 SLC31A1O15431 190 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 ZNF81P51508 661 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 CDH11P55287 796 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 HMGCS1Q01581 520 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 ZNF800Q2TB10 664 aaPredicted RBP eCLIP16.73■□□□□ 0.27
ITGB4-201ENST00000200181 BEX2Q9BXY8 128 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 BEX1Q9HBH7 125 aa16.73■□□□□ 0.27
ITGB4-201ENST00000200181 TRAV6A0A075B6T7 132 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 DLGAP1O14490 977 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 ANXA3P12429 323 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 CASRP41180 1078 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 TAS2R43P59537 309 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 PCBP2Q15366 365 aaKnown RBP eCLIP16.72■□□□□ 0.273e-6■■■■□ 22.2
ITGB4-201ENST00000200181 ODF4Q2M2E3 257 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SHKBP1Q8TBC3 707 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 MSANTD3Q96H12 275 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 PFDN5Q99471 154 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 ACBD6Q9BR61 282 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 OR10A4Q9H209 315 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 UBQLN2Q9UHD9 624 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 A0A1B0GVT2 93 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 BHMG1C9JSJ3 638 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-201ENST00000200181 ITM2AO43736 263 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 ALPPL2P10696 532 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 BMP8BP34820 402 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 CLCNKBP51801 687 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 BMP8AQ7Z5Y6 402 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 OR8S1Q8NH09 359 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 PCED1BQ96HM7 432 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 FGFBP2Q9BYJ0 223 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 USP29Q9HBJ7 922 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SDHAF3Q9NRP4 125 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 TAS2R3Q9NYW6 316 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 C2CD4BA6NLJ0 364 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 LRRN3E7EW58 273 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 TBX10O75333 385 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 FXYD6P3P58550 94 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 DRICH1Q6PGQ1 229 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-201ENST00000200181 BORCS8Q96FH0 119 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 PYURFQ96I23 114 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 ZNF649Q9BS31 505 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 LRRN3Q9H3W5 708 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SLC35F4A4IF30 521 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 A8MUA0 341 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SCDO00767 359 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SLC19A2O60779 497 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 HCAR3P49019 387 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SH3D19Q5HYK7 790 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 C3orf33Q6P1S2 294 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 NUS1Q96E22 293 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 DPYSL5Q9BPU6 564 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 RPH3AQ9Y2J0 694 aaPredicted RBP16.72■□□□□ 0.27
ITGB4-201ENST00000200181 ECI2O75521 394 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 NR2C1P13056 603 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 F8A1P23610 371 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 RAB39AQ14964 217 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 LRRC66Q68CR7 880 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 SLC36A4Q6YBV0 504 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 HSDL2Q6YN16 418 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 GPR20Q99678 358 aa16.72■□□□□ 0.27
ITGB4-201ENST00000200181 RIOK2Q9BVS4 552 aaKnown RBP16.72■□□□□ 0.27
ITGB4-201ENST00000200181 TLX2O43763 284 aaPredicted RBP16.71■□□□□ 0.27
ITGB4-201ENST00000200181 DGKGP49619 791 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 SP3Q02447 781 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 VTCN1Q7Z7D3 282 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 MFSD8Q8NHS3 518 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 SCGB1C1Q8TD33 95 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 PNPLA2Q96AD5 504 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 SLC22A18Q96BI1 424 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 IFT52Q9Y366 437 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 BORCS7-ASMTA0A0B4J1R7 106 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 A0A1B0GVI7 797 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 CREB1P16220 341 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 ST3GAL3Q11203 375 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 SLC24A5Q71RS6 500 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 SLC29A4Q7RTT9 530 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 TMEM41AQ96HV5 264 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 RPL10LQ96L21 214 aaKnown RBP16.71■□□□□ 0.27
ITGB4-201ENST00000200181 PHB2Q99623 299 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 PKP2Q99959 881 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 EFCAB11Q9BUY7 163 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 LIN28AQ9H9Z2 209 aaKnown RBP16.71■□□□□ 0.27
ITGB4-201ENST00000200181 PPM1HQ9ULR3 514 aa16.71■□□□□ 0.27
ITGB4-201ENST00000200181 AGPSO00116 658 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms