RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 TRUB1Q8WWH5 349 aaKnown RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 WRAP53Q9BUR4 548 aaKnown RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 TRIT1Q9H3H1 467 aaKnown RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 RDH14Q9HBH5 336 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 IL1RAPQ9NPH3 570 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 LEFTY2O00292 366 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 PCDHGA12O60330 932 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 SLC16A8O95907 504 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 DBTP11182 482 aaKnown RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 PRPS1L1P21108 318 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 PCMT1P22061 227 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 PDHA2P29803 388 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 CD6P30203 668 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 PFN3P60673 137 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 DEFB103AP81534 67 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 MVKQ03426 396 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 GAB1Q13480 694 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 CBX2Q14781 532 aaPredicted RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 CLCA4Q14CN2 919 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 AGTRAPQ6RW13 159 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 LRRC70Q7Z2Q7 622 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 SETD9Q8NE22 299 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 UBTD2Q8WUN7 234 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 TMEM184CQ9NVA4 438 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 TMEM45AQ9NWC5 275 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 SPASTQ9UBP0 616 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ERGIC3Q9Y282 383 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 CCDC88CQ9P219 2028 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 LRG1P02750 347 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ETFAP13804 333 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 POU1F1P28069 291 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 HPCAL1P37235 193 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 SEPHS1P49903 392 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ST13P50502 369 aaKnown RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 UAP1L1Q3KQV9 507 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 CPTPQ5TA50 214 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 Q6ZNB5 142 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 PSMA8Q8TAA3 256 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 TMEM159Q96B96 161 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 SLC46A2Q9BY10 475 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ABCB10Q9NRK6 738 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 RHCGQ9UBD6 479 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 KCNE1BA0A087WTH5 132 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ZSCAN9O15535 394 aaPredicted RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 TGFB1P01137 390 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 CCDC159P0C7I6 412 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 CD36P16671 472 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ZNF12P17014 697 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 ITIH1P19827 911 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 FPR1P21462 350 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 HOXD10P28358 340 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 MAPK8P45983 427 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 WNT3P56703 355 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 IFITM3Q01628 133 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 TOP3AQ13472 1001 aaPredicted RBP8.01□□□□□ -1.13
CDC27-201ENST00000066544 RFX4Q33E94 735 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 TPGS2Q68CL5 300 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 OTOP2Q7RTS6 562 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 SLC43A3Q8NBI5 491 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 DNASE1L2Q92874 299 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 APOL4Q9BPW4 351 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 TRIM39Q9HCM9 518 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 MAN2B2Q9Y2E5 1009 aa8.01□□□□□ -1.13
CDC27-201ENST00000066544 GABRR3A8MPY1 467 aa8□□□□□ -1.13
CDC27-201ENST00000066544 MYO1DO94832 1006 aa8□□□□□ -1.13
CDC27-201ENST00000066544 C8GP07360 202 aa8□□□□□ -1.13
CDC27-201ENST00000066544 HOXA9P31269 272 aa8□□□□□ -1.13
CDC27-201ENST00000066544 DNAJA1P31689 397 aaKnown RBP8□□□□□ -1.13
CDC27-201ENST00000066544 SOAT1P35610 550 aa8□□□□□ -1.13
CDC27-201ENST00000066544 SLC6A12P48065 614 aa8□□□□□ -1.13
CDC27-201ENST00000066544 CDH12P55289 794 aa8□□□□□ -1.13
CDC27-201ENST00000066544 TLE2Q04725 743 aa8□□□□□ -1.13
CDC27-201ENST00000066544 ARSIQ5FYB1 569 aa8□□□□□ -1.13
CDC27-201ENST00000066544 EEF1AKMT2Q5JPI9 291 aaKnown RBP8□□□□□ -1.13
CDC27-201ENST00000066544 TCEAL4Q96EI5 215 aa8□□□□□ -1.13
CDC27-201ENST00000066544 FEVQ99581 238 aa8□□□□□ -1.13
CDC27-201ENST00000066544 HERC2P3Q9BVR0 1158 aa8□□□□□ -1.13
CDC27-201ENST00000066544 OR51B5Q9H339 312 aa8□□□□□ -1.13
CDC27-201ENST00000066544 RETREG1Q9H6L5 497 aa8□□□□□ -1.13
CDC27-201ENST00000066544 TM9SF3Q9HD45 589 aa8□□□□□ -1.13
CDC27-201ENST00000066544 HMG20AQ9NP66 347 aa8□□□□□ -1.13
CDC27-201ENST00000066544 ITM2CQ9NQX7 267 aa8□□□□□ -1.13
CDC27-201ENST00000066544 RLIMQ9NVW2 624 aa8□□□□□ -1.13
CDC27-201ENST00000066544 CDH23Q9H251 3354 aa8□□□□□ -1.13
CDC27-201ENST00000066544 SLC16A6O15403 523 aa8□□□□□ -1.13
CDC27-201ENST00000066544 SUV39H1O43463 412 aa8□□□□□ -1.13
CDC27-201ENST00000066544 UGT2B11O75310 529 aa8□□□□□ -1.13
CDC27-201ENST00000066544 JUPP14923 745 aa8□□□□□ -1.13
CDC27-201ENST00000066544 RPS13P62277 151 aaKnown RBP8□□□□□ -1.13
CDC27-201ENST00000066544 CAMK2GQ13555 558 aaPredicted RBP8□□□□□ -1.13
CDC27-201ENST00000066544 COX20Q5RI15 118 aa8□□□□□ -1.13
CDC27-201ENST00000066544 CACUL1Q86Y37 369 aa8□□□□□ -1.13
CDC27-201ENST00000066544 C6orf62Q9GZU0 229 aaPredicted RBP8□□□□□ -1.13
CDC27-201ENST00000066544 RNF167Q9H6Y7 350 aa8□□□□□ -1.13
CDC27-201ENST00000066544 CREBZFQ9NS37 354 aa8□□□□□ -1.13
CDC27-201ENST00000066544 MAP4K5Q9Y4K4 846 aa8□□□□□ -1.13
CDC27-201ENST00000066544 BMP4P12644 408 aa8□□□□□ -1.13
CDC27-201ENST00000066544 SLC35A2P78381 396 aa8□□□□□ -1.13
CDC27-201ENST00000066544 NPRL3Q12980 569 aa8□□□□□ -1.13
CDC27-201ENST00000066544 MAD2L1BPQ15013 274 aaPredicted RBP8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms