RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Wdr53Q9DB94 358 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Rpl38Q9JJI8 70 aaKnown RBP9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Tcea2Q9QVN7 299 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Tcf20Q9EPQ8 1987 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 CrebbpP45481 2441 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Wdr90Q6ZPG2 1874 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 4932443I19RikA0A286YE38 169 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Gm13088A2AGW6 460 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vmn2r34E9PVI0 852 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vmn2r37F8VQD3 802 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vmn2r97K7N6Z2 861 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vmn2r93L7N1Z9 857 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 H2-T23P06339 357 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Klk1P15947 261 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ceacam1P31809 521 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Klk1b26P36369 261 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ppp1caP62137 330 aaKnown RBP9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cep295nlQ497N6 533 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Kctd8Q50H33 476 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cyb5d2Q5SSH8 263 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Satb1Q60611 764 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 IbspQ61711 324 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Slc13a5Q67BT3 572 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Dusp16Q6PCP3 660 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Atl1Q8BH66 558 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Gramd1cQ8CI52 457 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Gpn2Q8VEJ1 310 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Olfr48Q8VGN4 301 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 BsndQ8VIM4 307 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Hdac11Q91WA3 347 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ccdc83Q9D4V3 305 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pnp2Q9D8C9 305 aa9.58□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 SpegQ62407 3262 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Gm5751A2AHC8 147 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vmn1r86L7N213 316 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Grap2O89100 322 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cntn1P12960 1020 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Hoxa2P31245 372 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 AvpP35455 168 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 TfamP40630 243 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pxmp2P42925 194 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Shox2P70390 331 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Q3TTL0 348 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 JrkQ60976 557 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Drd1Q61616 446 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Il1rapQ61730 570 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Mapk10Q61831 464 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Rcbtb1Q6NXM2 531 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Amigo1Q80ZD8 492 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Leng9Q8BTN6 485 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Lrp11Q8CB67 483 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 P33monoxQ9DBN4 303 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Zbp1Q9QY24 411 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Tcp11x2A2AEI7 503 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 4931406B18RikA2RSL7 367 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Proca1B0QZF7 307 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ssxb8B1AY40 170 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Akap10O88845 662 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 LtfP08071 707 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Stx1bP61264 288 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Treml2Q2LA85 329 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 NfkbidQ2TB02 327 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Gpsm3Q3U1Z5 159 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pak6Q3ULB5 682 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Hdgfl2Q3UMU9 669 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 RgnQ64374 299 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Sdc3Q64519 442 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Nadsyn1Q711T7 725 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Olfr1313Q7TQW8 311 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 MtdhQ80WJ7 579 aaKnown RBP9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cpne3Q8BT60 533 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Smyd4Q8BTK5 799 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 OsgepQ8BWU5 335 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vps26bQ8C0E2 336 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pi4k2bQ8CBQ5 469 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 BmperQ8CJ69 685 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 DolkQ8R2Y3 534 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Mospd1Q8VEL0 213 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Setd6Q9CWY3 473 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 C1qtnf2Q9D8U4 294 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Spry4Q9WTP2 300 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Cldn9Q9Z0S7 217 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 L3mbtl4B1B1A0 621 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Susd5G3UW60 619 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 P06324 132 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 MpoP11247 718 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Svs4P18419 113 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Kir3dl1P83555 432 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Wnk2Q3UH66 2149 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 RflnbQ5SVD0 216 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Orai3Q6P8G8 290 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Mospd3Q8BGG6 235 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Sephs1Q8BH69 392 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Dclre1bQ8C7W7 541 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vps37aQ8CHS8 397 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Vmn1r89Q8R256 316 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Slc22a19Q8VCA0 551 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Pgm1Q9D0F9 562 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 Ccdc182Q9D9C6 152 aa9.57□□□□□ -0.88
Ccdc38-201ENSMUST00000092215 TesclQ9DAJ7 231 aa9.57□□□□□ -0.88
Retrieved 100 of 22,080 RNA–protein pairs in 40.9 ms