RNA–Protein interactions for RNA: ENSMUST00000053317.11

Bdnf-201, Transcript of Brain-derived neurotrophic factor, mousemouse

TSL 1 (best) BASIC

Gene Bdnf, Length 4,266 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-201ENSMUST00000053317 Zfp407G3UVV3 2246 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Eml5Q8BQM8 1977 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Capn5O08688 640 aaKnown RBP6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 CratP47934 626 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ypel5P62700 121 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 LcorlQ3U285 600 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Scn2bQ56A07 215 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Q5EBG8 199 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Nr1h2Q60644 446 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pou4f2Q63934 411 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cpped1Q8BFS6 312 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 TtpaQ8BWP5 278 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 BicralQ8CHH5 1074 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pacs1Q8K212 961 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vmn1r87Q8R255 295 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gjd3Q91YD1 278 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rsl24d1Q99L28 163 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Adck1Q9D0L4 525 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dusp26Q9D700 211 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Usp12Q9D9M2 370 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 AcadsbQ9DBL1 432 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cts8Q9JI81 333 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Adam18Q9R157 719 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Fiz1Q9WTJ4 500 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rbck1Q9WUB0 508 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ccdc166S4R181 449 aa6.69□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Nt5c1aA3KFX0 365 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ttll3A4Q9E5 927 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Anxa8O35640 327 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tpst1O70281 370 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pdlim1O70400 327 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Slc2a7P0C6A1 513 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 MpoP11247 718 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Prim2P33610 505 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Eef1a2P62631 463 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Zmiz1Q6P1E1 1072 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 B3gnt5Q8BGY6 376 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr1276Q8VF40 312 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr1361Q8VFH0 317 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vsx1Q91V10 363 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Lrrc40Q9CRC8 602 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tspan11Q9D1D1 253 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Mcemp1Q9D8U6 183 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Jam2Q9JI59 298 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Wdr12Q9JJA4 423 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rai2Q9QVY8 529 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vnn3Q9QZ25 500 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Htra1Q9R118 480 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Bod1lE9Q6J5 3032 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ahctf1Q8CJF7 2243 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Wdfy3Q6VNB8 3508 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pcnx1Q9QYC1 2344 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Arfip1G5E8V9 373 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rhox2gL7MUB9 191 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr738L7N1X7 311 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pknox1O70477 436 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rtn2O70622 471 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 CatP24270 527 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tbxa2rP30987 341 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ceacam1P31809 521 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Oprd1P32300 372 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Alox5P48999 674 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rps3P62908 243 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 QrfprP83861 433 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Frg1P97376 258 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Nrsn1P97799 196 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 MogQ61885 246 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Cpsf6Q6NVF9 551 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Svs2Q8BS30 375 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ccdc32Q8BS39 179 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Pias2Q8C5D8 621 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Klk13Q8CGR6 276 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dennd1aQ8K382 1016 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr1469Q8VFW5 309 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 OoepQ9CWE6 164 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Agpat5Q9D1E8 365 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ppil6Q9D6D8 278 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Dgcr8Q9EQM6 773 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tnfrsf22Q9ER62 198 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Arl9F7BE40 171 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Syngr1O55100 234 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ap1g1P22892 822 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Htr3aP23979 487 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 HmgclP38060 325 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 S100a13P97352 98 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Gdf9Q07105 441 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 AcadsQ07417 412 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 EndouQ3V188 412 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Hspb6Q5EBG6 162 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Armc5Q5EBP3 926 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Taar7bQ5QD11 358 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sh3rf1Q69ZI1 892 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Rps27lQ6ZWY3 84 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Ppp2r1bQ7TNP2 601 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Olfr798Q7TRH8 311 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Vac14Q80WQ2 782 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Psmd11Q8BG32 422 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem214Q8BM55 687 aaKnown RBP6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Sdhaf3Q8BQU3 125 aa6.68□□□□□ -1.34
Bdnf-201ENSMUST00000053317 Tmem62Q8BXJ9 643 aa6.68□□□□□ -1.34
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms