RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 Hmgcll1Q8JZS7 343 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Lrrc56Q8K375 552 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Tmem203Q8R235 136 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Olfr348Q8VGK3 313 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gpx6Q91WR8 221 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Jph3Q9ET77 744 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rpl38Q9JJI8 70 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vmn2r121A2BE32 847 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vmn2r94E9PZK8 818 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cd163Q2VLH6 1121 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Spryd7Q3TFQ1 196 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 FuzQ3UYI6 415 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Zbtb2Q3V3W4 514 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Tnpo3Q6P2B1 923 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ranbp10Q6VN19 620 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Olfr503Q7TRU8 323 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vangl1Q80Z96 526 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 HadhaQ8BMS1 763 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 RhoqQ8R527 205 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Olfr561Q8VGZ6 314 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rnaseh2aQ9CWY8 301 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Adck1Q9D0L4 525 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rpl4Q9D8E6 419 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ubqln2Q9QZM0 638 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Col5a3Q9JLI2 1739 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Otud3B1AZ99 396 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gm4775F7ANJ3 135 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Vmn2r9K7N6Z8 848 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rgs7O54829 469 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PahP16331 453 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Anxa5P48036 319 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 NyxP83503 476 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rbbp8Q80YR6 893 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 SgtaQ8BJU0 315 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Asrgl1Q8C0M9 326 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Zbtb9Q8CDC7 459 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rnf130Q8VEM1 419 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Olfr791Q8VGJ0 312 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PdgfdQ925I7 370 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 TescQ9JKL5 214 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Znf207Q9JMD0 495 aaKnown RBP16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Spint1Q9R097 507 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Kcnk7Q9Z2T1 307 aa16.36■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Zscan5bB2RTN3 468 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gm11397F6V5V4 377 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Fmo6J3QMN6 532 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mtnd1P03888 318 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PuraP42669 321 aaKnown RBP16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Nanos3P60324 178 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mrgprb1Q3UG61 350 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 CrxosQ3UL53 246 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 MslnQ61468 625 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Med26Q7TN02 588 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Aoc2Q812C9 757 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Wdfy2Q8BUB4 400 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Tspan33Q8R3S2 283 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Serpinb9gQ8VHQ1 377 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Psat1Q99K85 370 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ppil6Q9D6D8 278 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Tlr4Q9QUK6 835 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 1700025B11RikA0A087WNZ6 93 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Olfr1480A0A140LIR8 359 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cyp4a12bA2A974 508 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Hoxb9P20615 250 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 CtskP55097 329 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gm5113Q3UGK8 141 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ggt1Q60928 568 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ces5aQ6AW46 575 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 MtdhQ80WJ7 579 aaKnown RBP16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PxkQ8BX57 582 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Fam126bQ8C729 530 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Sphk1Q8CI15 382 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cyp4a12aQ91WL5 508 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Nrif1Q923B3 828 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rps19Q9CZX8 145 aaKnown RBP16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gbe1Q9D6Y9 702 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Ovca2Q9D7E3 225 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Nfkb2Q9WTK5 899 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Sult2a7A0A1B0GRF0 313 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Zfp40B1B1D3 796 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 F9P16294 471 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Rab2bP59279 216 aaKnown RBP16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 PomkQ3TUA9 349 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Sohlh1Q6IUP1 357 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Pitrm1Q8K411 1036 aaKnown RBP16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Actl11Q9D5V1 1207 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Skp2Q9Z0Z3 424 aa16.35■□□□□ 0.21
Ctcf-201ENSMUST00000005841 MylkQ6PDN3 1941 aaKnown RBP16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Igkv10-96A0A140T8M1 115 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 B020004C17RikJ3QP07 232 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Gm17019K7N6W5 255 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Dgcr6O35347 198 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Mkln1O89050 735 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 G2e3Q5RJY2 716 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Runx1t1Q61909 577 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Sema3bQ62177 748 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Trpv1Q704Y3 839 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cyth4Q80YW0 393 aa16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Cpeb2Q812E0 521 aaKnown RBP16.34■□□□□ 0.21
Ctcf-201ENSMUST00000005841 Scn3bQ8BHK2 215 aa16.34■□□□□ 0.21
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms