RNA–Protein interactions for RNA: ENST00000641847.1

PHGDH-228, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 692 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-228ENST00000641847 JPH3Q8WXH2 748 aaPredicted RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 L3HYPDHQ96EM0 354 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 MENTQ9BUN1 341 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 RAB11FIP5Q9BXF6 653 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ERVK-6Q9BXR3 956 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 XKR8Q9H6D3 395 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ACSS2Q9NR19 701 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 OGFRQ9NZT2 677 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 PTBP2Q9UKA9 531 aaKnown RBP9.07□□□□□ -0.96
PHGDH-228ENST00000641847 VPS4AQ9UN37 437 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ICKQ9UPZ9 632 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 LOXL2Q9Y4K0 774 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 ASB1Q9Y576 335 aa9.07□□□□□ -0.96
PHGDH-228ENST00000641847 SPENQ96T58 3664 aaKnown RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF839A8K0R7 811 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 D6RAR5 112 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 NTN3O00634 580 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CAPN5O15484 640 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CCNT2O60583 730 aaKnown RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 PRAMEF10O60809 474 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 WDR47O94967 919 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SERPINE1P05121 402 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ERGP11308 486 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 HGFP14210 728 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 IMPDH1P20839 514 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CCKBRP32239 447 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SHMT2P34897 504 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 HSD17B2P37059 387 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 MDH1P40925 334 aaKnown RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 FASLGP48023 281 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SLC6A12P48065 614 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 RAB28P51157 221 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 PDX1P52945 283 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 NAE1Q13564 534 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 TSTA3Q13630 321 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ARHGAP19Q14CB8 494 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 PCBP2Q15366 365 aaKnown RBP eCLIP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CYP2A13Q16696 494 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 UNC50Q53HI1 259 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CFAP157Q5JU67 520 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF678Q5SXM1 525 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CHCHD2P9Q5T1J5 151 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ANKS6Q68DC2 871 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 OGFOD3Q6PK18 319 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 LRRC70Q7Z2Q7 622 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 C17orf82Q86X59 251 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZFAND4Q86XD8 727 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF761Q86XN6 746 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SLC35F3Q8IY50 421 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 KLHDC8AQ8IYD2 350 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SYTL1Q8IYJ3 562 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 C2orf73Q8N5S3 287 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 IL22RA1Q8N6P7 574 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CCNYL1Q8N7R7 359 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 LMNTD1Q8N9Z9 388 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 GPR156Q8NFN8 814 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 RAB3IL1Q8TBN0 382 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 LRRC8CQ8TDW0 803 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SSC4DQ8WTU2 575 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF480Q8WV37 535 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CKAP2Q8WWK9 683 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 LCN9Q8WX39 176 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ESAMQ96AP7 390 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 MAGEB18Q96M61 343 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 NRTNQ99748 197 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 GATA5Q9BWX5 397 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 C1QTNF3Q9BXJ4 246 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 PITPNM3Q9BZ71 974 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CD244Q9BZW8 370 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 B3GNT4Q9C0J1 378 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ATG10Q9H0Y0 220 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 GSTO2Q9H4Y5 243 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 MANSC1Q9H8J5 431 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 SLC40A1Q9NP59 571 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 CCDC177Q9NQR7 707 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF71Q9NQZ8 489 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 LNPEPQ9UIQ6 1025 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 PCTPQ9UKL6 214 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 TNPO3Q9Y5L0 923 aaKnown RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ANKRD12Q6UB98 2062 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ARHGEF17Q96PE2 2063 aaPredicted RBP9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZFHX3Q15911 3703 aa9.06□□□□□ -0.96
PHGDH-228ENST00000641847 ZNF891A8MT65 544 aaPredicted RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 TMEM114B3SHH9 223 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 K7EPI3 171 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 E2F3O00716 465 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 NPHS1O60500 1241 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 STK16O75716 305 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 SUPT7LO94864 414 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 RPLP0P05388 317 aaKnown RBP9.05□□□□□ -0.96
PHGDH-228ENST00000641847 GRK2P25098 689 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 GGT5P36269 586 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 GDF5P43026 501 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 CD97P48960 835 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 MAPK10P53779 464 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 NAGLUP54802 743 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 BST1Q10588 318 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 KLRB1Q12918 225 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 GTF2H2Q13888 395 aa9.05□□□□□ -0.96
PHGDH-228ENST00000641847 FASTKQ14296 549 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms