RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	MDM4	O15151	490 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	FTH1	P02794	183 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	XRCC1	P18887	633 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TGM2	P21980	687 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CST5	P28325	142 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	GMPR	P36959	345 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PREP	P48147	710 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PSMD8	P48556	350 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PER3	P56645	1201 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PRKCD	Q05655	676 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TNK2	Q07912	1038 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	KLHL26	Q53HC5	615 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PAN3	Q58A45	887 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PIGG	Q5H8A4	983 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	NOMO2	Q5JPE7	1267 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	INTS6L	Q5JSJ4	861 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TAS1R1	Q7RTX1	841 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TMEM173	Q86WV6	379 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ZNF227	Q86WZ6	799 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ARID3B	Q8IVW6	561 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SCN4B	Q8IWT1	228 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	NAGS	Q8N159	534 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	PRR18	Q8N4B5	295 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	NPW	Q8N729	165 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TSPEAR	Q8WU66	669 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	TFB1M	Q8WVM0	346 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	POM121	Q96HA1	1249 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	C7orf34	Q96L11	122 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	GPR137	Q96N19	417 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC2A13	Q96QE2	648 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	ILKAP	Q9H0C8	392 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	CHMP1A	Q9HD42	196 aa	Predicted RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	OLA1	Q9NTK5	396 aa	Known RBP	7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	OSER1	Q9NX31	292 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	IMPAD1	Q9NX62	359 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC17A7	Q9P2U7	560 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	MLX	Q9UH92	298 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC23A1	Q9UHI7	598 aa		7.75	□□□□□ -1.17
RTTN-223	ENST00000640931		A0A1B0GV90	55 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	PIPSL	A2A3N6	862 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	KBTBD13	C9JR72	458 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	KCNK1	O00180	336 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CLDN4	O14493	209 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	GPR171	O14626	319 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	STX16	O14662	325 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	GPR37	O15354	613 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	VEGFD	O43915	354 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ULK1	O75385	1050 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ALDH1A1	P00352	501 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	APRT	P07741	180 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ACAA1	P09110	424 aa	Predicted RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	FCGR1A	P12314	374 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ME2	P23368	584 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CD79B	P40259	229 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	LHX1	P48742	406 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	VEGFC	P49767	419 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	HERVK_113	P63132	956 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	PSPH	P78330	225 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	DEFA6	Q01524	100 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	STX4	Q12846	297 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	FGL2	Q14314	439 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CBX2	Q14781	532 aa	Predicted RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	SLC39A12	Q504Y0	691 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	PABPC1L2A	Q5JQF8	200 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	EFHC2	Q5JST6	749 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	NXNL2	Q5VZ03	156 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	OVOS1	Q6IE37	1185 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	TEX261	Q6UWH6	196 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CES3	Q6UWW8	571 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	RSPO2	Q6UXX9	243 aa	Predicted RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CHSY3	Q70JA7	882 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ZNF534	Q76KX8	674 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	EFL1	Q7Z2Z2	1120 aa	Known RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	TAC4	Q86UU9	113 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CDKL3	Q8IVW4	592 aa	Predicted RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	OR8H3	Q8N146	312 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	TMEM199	Q8N511	208 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	DBF4B	Q8NFT6	615 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	OR1M1	Q8NGA1	313 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	POC1B	Q8TC44	478 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CELF6	Q96J87	481 aa	Known RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	FYTTD1	Q96QD9	318 aa	Known RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	DPYSL5	Q9BPU6	564 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ALG13	Q9NP73	1137 aa	Known RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	TBC1D13	Q9NVG8	400 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	DDIT4	Q9NX09	232 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	WARS2	Q9UGM6	360 aa	Known RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	ZNF639	Q9UID6	485 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	BTNL2	Q9UIR0	455 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CDH9	Q9ULB4	789 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	CRYL1	Q9Y2S2	319 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	SAMHD1	Q9Y3Z3	626 aa	Known RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	PCDHGB1	Q9Y5G3	927 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931		U3KQ87	197 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	MPTX1	A8MV57	137 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931		L7N2F9	121 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	TBC1D4	O60343	1298 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	LPXN	O60711	386 aa		7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	PLG	P00747	810 aa	Predicted RBP	7.74	□□□□□ -1.17
RTTN-223	ENST00000640931	LTF	P02788	710 aa		7.74	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms