RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 OR2A5Q96R48 311 aa24.03■■□□□ 1.44
VEGFA-230ENST00000640482 PLAC1Q9HBJ0 212 aa24.03■■□□□ 1.44
VEGFA-230ENST00000640482 FBXL4Q9UKA2 621 aa24.03■■□□□ 1.44
VEGFA-230ENST00000640482 ADAMTS6Q9UKP5 1117 aa24.03■■□□□ 1.44
VEGFA-230ENST00000640482 PDE10AQ9Y233 779 aa24.03■■□□□ 1.44
VEGFA-230ENST00000640482 RUVBL1Q9Y265 456 aaKnown RBP24.03■■□□□ 1.44
VEGFA-230ENST00000640482 PABPN1LA6NDY0 278 aaKnown RBP24.02■■□□□ 1.44
VEGFA-230ENST00000640482 SOCS6O14544 535 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 SORBS2O94875 1100 aaKnown RBP24.02■■□□□ 1.44
VEGFA-230ENST00000640482 TBPL1P62380 186 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 FRG1Q14331 258 aaKnown RBP24.02■■□□□ 1.44
VEGFA-230ENST00000640482 HKDC1Q2TB90 917 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 PRAMEF13Q5VWM6 474 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 GPATCH11Q8N954 259 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 STT3BQ8TCJ2 826 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 CRB3Q9BUF7 120 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 MFRPQ9BY79 579 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 TRIM31Q9BZY9 425 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 SLAMF7Q9NQ25 335 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 CUEDC1Q9NWM3 386 aaPredicted RBP24.02■■□□□ 1.44
VEGFA-230ENST00000640482 SLC17A6Q9P2U8 582 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 HS3ST3B1Q9Y662 390 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 MYO18BQ8IUG5 2567 aa24.02■■□□□ 1.44
VEGFA-230ENST00000640482 EFCAB8A8MWE9 144 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 H7BY64 318 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 HAT1O14929 419 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 HIST1H2AGP0C0S8 130 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-230ENST00000640482 ZGLP1P0C6A0 271 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 HIST1H2ADP20671 130 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 IL2P60568 153 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 DSG2Q14126 1118 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 TUBB8Q3ZCM7 444 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 HECTD2Q5U5R9 776 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 SLC6A19Q695T7 634 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 FAM45BPQ6NSW5 357 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 TRMT10BQ6PF06 316 aaKnown RBP24.01■■□□□ 1.43
VEGFA-230ENST00000640482 RBMXL3Q8N7X1 1067 aaKnown RBP24.01■■□□□ 1.43
VEGFA-230ENST00000640482 FAM45AQ8TCE6 357 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 TM9SF4Q92544 642 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 PNPLA2Q96AD5 504 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 HIST1H2AHQ96KK5 128 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 PRAP1Q96NZ9 151 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 KRT12Q99456 494 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 HIST1H2AJQ99878 128 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 WDR83Q9BRX9 315 aaKnown RBP24.01■■□□□ 1.43
VEGFA-230ENST00000640482 H2AFJQ9BTM1 129 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 ZNF552Q9H707 407 aaPredicted RBP24.01■■□□□ 1.43
VEGFA-230ENST00000640482 TMEM184CQ9NVA4 438 aa24.01■■□□□ 1.43
VEGFA-230ENST00000640482 UBR5O95071 2799 aaPredicted RBP24■■□□□ 1.43
VEGFA-230ENST00000640482 CCDC88CQ9P219 2028 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 MASP2O00187 686 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 VPS4BO75351 444 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 ANXA5P08758 320 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 CCND1P24385 295 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 ITGA3P26006 1051 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 KLC1Q07866 573 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 NDUFA9Q16795 377 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 IRAK1BP1Q5VVH5 260 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 AGTRAPQ6RW13 159 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 KIRREL2Q6UWL6 708 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 ANKMY2Q8IV38 441 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 SYNPO2LQ9H987 977 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 ZFATQ9P243 1243 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 VPS4AQ9UN37 437 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 VWA7Q9Y334 891 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 PCM1Q15154 2024 aa24■■□□□ 1.43
VEGFA-230ENST00000640482 IGLV3-12A0A075B6K2 115 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 FDXRP22570 491 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 RPS15AP62244 130 aaKnown RBP23.99■■□□□ 1.43
VEGFA-230ENST00000640482 PDIA2Q13087 525 aaKnown RBP23.99■■□□□ 1.43
VEGFA-230ENST00000640482 PLD3Q8IV08 490 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 BBOF1Q8ND07 529 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 MMABQ96EY8 250 aaPredicted RBP23.99■■□□□ 1.43
VEGFA-230ENST00000640482 YIPF2Q9BWQ6 316 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 DRC3Q9H069 523 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 TRPC4Q9UBN4 977 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 C3orf18Q9UK00 162 aa23.99■■□□□ 1.43
VEGFA-230ENST00000640482 VARSP26640 1264 aaKnown RBP23.98■■□□□ 1.43
VEGFA-230ENST00000640482 MGAT5Q09328 741 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 NAE1Q13564 534 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 IGFL3Q6UXB1 125 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 MBOAT1Q6ZNC8 495 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 C17orf64Q86WR6 236 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 PRSS58Q8IYP2 241 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 FBXO36Q8NEA4 188 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 THAP11Q96EK4 314 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 TRIM54Q9BYV2 358 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 ATG10Q9H0Y0 220 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 C14orf105Q9NVL8 296 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 SNX24Q9Y343 169 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 MAP4K5Q9Y4K4 846 aa23.98■■□□□ 1.43
VEGFA-230ENST00000640482 MAP2K7O14733 419 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 TSPAN12O95859 305 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 ACPPP15309 386 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 SLC26A3P40879 764 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 RPL21P46778 160 aaKnown RBP23.97■■□□□ 1.43
VEGFA-230ENST00000640482 AP1S2P56377 157 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 FAM53BQ14153 422 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 PHKG1Q16816 387 aa23.97■■□□□ 1.43
VEGFA-230ENST00000640482 VWA2Q5GFL6 755 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms