RNA–Protein interactions for RNA: ENST00000640341.1

SCARB2-221, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 3,403 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-221ENST00000640341 ACPPP15309 386 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 PREPP48147 710 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 SMARCB1Q12824 385 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 GBX1Q14549 363 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.14□□□□□ -0.15
SCARB2-221ENST00000640341 MACC1Q6ZN28 852 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 TPT1P8Q9HAU6 139 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 FZD4Q9ULV1 537 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 WNT9AO14904 365 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 YY2O15391 372 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 PCDHGA12O60330 932 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 PRPS2P11908 318 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 RPS3P23396 243 aaKnown RBP eCLIP14.14□□□□□ -0.151e-6■■■■■ 29.8
SCARB2-221ENST00000640341 AOAHP28039 575 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 CD6P30203 668 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 DNAJA1P31689 397 aaKnown RBP14.14□□□□□ -0.15
SCARB2-221ENST00000640341 SERPINB10P48595 397 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 UGT8Q16880 541 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 COLEC12Q5KU26 742 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 SLC8B1Q6J4K2 584 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.14□□□□□ -0.15
SCARB2-221ENST00000640341 SLC22A16Q86VW1 577 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 VN1R3Q9BXE9 311 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 TMEM121BQ9BXQ6 578 aaPredicted RBP14.14□□□□□ -0.15
SCARB2-221ENST00000640341 RNF167Q9H6Y7 350 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 BRD9Q9H8M2 597 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 DNAJC11Q9NVH1 559 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 ZDHHC3Q9NYG2 299 aa14.14□□□□□ -0.15
SCARB2-221ENST00000640341 TMEM202A6NGA9 273 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 EFCAB9A8MZ26 197 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 E7EQ34 232 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 KCNK5O95279 499 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 AMD1P17707 334 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 SLC35A2P78381 396 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 CAMK2GQ13555 558 aaPredicted RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 CCSMST1Q4G0I0 132 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 Q6ZVU0 165 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 SLC44A2Q8IWA5 706 aaPredicted RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 CHPFQ8IZ52 775 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 OR2AP1Q8NGE2 309 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 OR5AK3PQ8NH89 298 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 MCFD2Q8NI22 146 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 KIAA1522Q9P206 1035 aaPredicted RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 OR51B4Q9Y5P0 310 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 SLC16A6O15403 523 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 TBX1O43435 398 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 POU1F1P28069 291 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 PTSQ03393 145 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 SREBF2Q12772 1141 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 TP53BP2Q13625 1128 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 DUOXA1Q1HG43 343 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 CALHM3Q86XJ0 350 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 C1orf52Q8N6N3 182 aaKnown RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 ZNF366Q8N895 744 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 COPS4Q9BT78 406 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 ACOT13Q9NPJ3 140 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 FPR1P21462 350 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 MAPK1P28482 360 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 PTPN6P29350 595 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 RYKP34925 604 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 GZMMP51124 257 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 GSTM4Q03013 218 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 GPNMBQ14956 572 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 IER5LQ5T953 404 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 KIAA1614Q5VZ46 1190 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 DPY19L3Q6ZPD9 716 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 USP45Q70EL2 814 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 CCDC71Q8IV32 467 aaPredicted RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 SYTL1Q8IYJ3 562 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 CLIP4Q8N3C7 705 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 DNASE1L2Q92874 299 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 SLC29A3Q9BZD2 475 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 WDR12Q9GZL7 423 aaKnown RBP14.13□□□□□ -0.15
SCARB2-221ENST00000640341 MTG2Q9H4K7 406 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 MAGIXQ9H6Y5 334 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 TM9SF3Q9HD45 589 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 ATAD3AQ9NVI7 634 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 TMEM45AQ9NWC5 275 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 B4GALT6Q9UBX8 382 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 ACSL6Q9UKU0 697 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 PMF1-BGLAPU3KQ54 211 aa14.13□□□□□ -0.15
SCARB2-221ENST00000640341 TRIM64BA6NI03 449 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 SLC22A1O15245 554 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 GABARAPO95166 117 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 NPRL3Q12980 569 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 MAD2L1BPQ15013 274 aaPredicted RBP14.12□□□□□ -0.15
SCARB2-221ENST00000640341 GPR33Q49SQ1 333 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 LRIF1Q5T3J3 769 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 CADM3Q8N126 398 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 C2orf73Q8N5S3 287 aaPredicted RBP14.12□□□□□ -0.15
SCARB2-221ENST00000640341 CHST14Q8NCH0 376 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 C2orf15Q8WU43 125 aaKnown RBP14.12□□□□□ -0.15
SCARB2-221ENST00000640341 ALG14Q96F25 216 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 TMEM169Q96HH4 297 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 RPS6KA6Q9UK32 745 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 LSM7Q9UK45 103 aaKnown RBP14.12□□□□□ -0.15
SCARB2-221ENST00000640341 CASP8AP2Q9UKL3 1982 aa14.12□□□□□ -0.15
SCARB2-221ENST00000640341 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.12□□□□□ -0.15
SCARB2-221ENST00000640341 MGAT4DA6NG13 374 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms