RNA–Protein interactions for RNA: ENST00000638114.1

CACNA1A-259, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 3

Gene CACNA1A, Length 517 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-259ENST00000638114 PLD3Q8IV08 490 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 BBOF1Q8ND07 529 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 SPATA4Q8NEY3 305 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 ALKBH8Q96BT7 664 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 OR2A5Q96R48 311 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 DPH5Q9H2P9 285 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 SYNPO2LQ9H987 977 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 RUVBL1Q9Y265 456 aaKnown RBP15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 VWA7Q9Y334 891 aa15.98■□□□□ 0.15
CACNA1A-259ENST00000638114 FLNBO75369 2602 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 FAM187AA6NFU0 413 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 E7ESA3 106 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 H7BY64 318 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 AGPSO00116 658 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 MASP2O00187 686 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 DPM1O60762 260 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 TSPAN12O95859 305 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 HIST1H2AGP0C0S8 130 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 HIST1H2ADP20671 130 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 SAT1P21673 171 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 FBLP22087 321 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 FDXRP22570 491 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 MMP11P24347 488 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 MLLT10P55197 1068 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 FOXK1P85037 733 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 OCA2Q04671 838 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 C2orf54Q08AI8 447 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 CALCOCO2Q13137 446 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 FRG1Q14331 258 aaKnown RBP15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 PHKG1Q16816 387 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 NADK2Q4G0N4 442 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 AGTRAPQ6RW13 159 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 PRSS58Q8IYP2 241 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 ZBED8Q8IZ13 594 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 HIST1H2AHQ96KK5 128 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 PRAP1Q96NZ9 151 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 OLFM1Q99784 485 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 HIST1H2AJQ99878 128 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 H2AFJQ9BTM1 129 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 PCBD2Q9H0N5 130 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 ATG10Q9H0Y0 220 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 ZNF282Q9UDV7 671 aaPredicted RBP15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 CDC14AQ9UNH5 594 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 PSAT1Q9Y617 370 aa15.97■□□□□ 0.15
CACNA1A-259ENST00000638114 RAD51CO43502 376 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 HRH2P25021 359 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 EMP3P54852 163 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 RELAQ04206 551 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 NAE1Q13564 534 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 RBBP7Q16576 425 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 VWA5B1Q5TIE3 1220 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 SYT10Q6XYQ8 523 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 CAPN12Q6ZSI9 719 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 MAATS1Q7Z4T9 603 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 STRA8Q7Z7C7 330 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 C17orf64Q86WR6 236 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 GALNT16Q8N428 558 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 STT3BQ8TCJ2 826 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 NACC2Q96BF6 587 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 MIEF2Q96C03 454 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 SMAD5Q99717 465 aaKnown RBP15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 ERP44Q9BS26 406 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 CRB3Q9BUF7 120 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 YIPF2Q9BWQ6 316 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 MFRPQ9BY79 579 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 TRIM54Q9BYV2 358 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 ATP13A2Q9NQ11 1180 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 TMEM184CQ9NVA4 438 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 ARL15Q9NXU5 204 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 FBXL4Q9UKA2 621 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 PLAAQ9Y263 795 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 HS3ST3B1Q9Y662 390 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 NUP210LQ5VU65 1888 aa15.96■□□□□ 0.15
CACNA1A-259ENST00000638114 VSTM2BA6NLU5 285 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 TTLL8A6PVC2 850 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 TXNDC9O14530 226 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 SOCS6O14544 535 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 P2RX6O15547 441 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 PRPF4O43172 522 aaKnown RBP eCLIP15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 ALOX12BO75342 701 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 STATHP02808 62 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 ZGLP1P0C6A0 271 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 CCND1P24385 295 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 ETF1P62495 437 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 KLC1Q07866 573 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 MYBPC3Q14896 1274 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 GARNL3Q5VVW2 1013 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 ZC3HC1Q86WB0 502 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 HPS6Q86YV9 775 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 PYROXD1Q8WU10 500 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 MVB12AQ96EY5 273 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 MMABQ96EY8 250 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 SAYSD1Q9NPB0 183 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 SEMA3GQ9NS98 782 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 MOCS1Q9NZB8 636 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 WHRNQ9P202 907 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 TRPC4Q9UBN4 977 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 SH2B3Q9UQQ2 575 aa15.95■□□□□ 0.14
CACNA1A-259ENST00000638114 ASH1LQ9NR48 2969 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-259ENST00000638114 FAM95CA0A1B0GW59 222 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms