RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 ZNF552Q9H707 407 aaPredicted RBP18.07■□□□□ 0.48
CLN6-221ENST00000637494 PARVBQ9HBI1 364 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 TMEM184CQ9NVA4 438 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 LUZP4Q9P127 313 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 RNF14Q9UBS8 474 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 CHMP2BQ9UQN3 213 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 RUVBL1Q9Y265 456 aaKnown RBP18.07■□□□□ 0.48
CLN6-221ENST00000637494 B3GNT3Q9Y2A9 372 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 MAP4K5Q9Y4K4 846 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 HS3ST3B1Q9Y662 390 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 SEC16AO15027 2179 aa18.07■□□□□ 0.48
CLN6-221ENST00000637494 IGKV1-8A0A0C4DH67 115 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 USP27XA6NNY8 438 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 SOCS6O14544 535 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 MAP2K7O14733 419 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 HAT1O14929 419 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 AHSGP02765 367 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 ACPPP15309 386 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 CXCR2P25025 360 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 IL2P60568 153 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 KLC1Q07866 573 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 MSS51Q4VC12 460 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 AGAP7PQ5VUJ5 663 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 IGFL3Q6UXB1 125 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 CREG2Q8IUH2 290 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 PRSS58Q8IYP2 241 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 GPATCH11Q8N954 259 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 LINGO1Q96FE5 620 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 SNF8Q96H20 258 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 C10orf90Q96M02 699 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 AGAP4Q96P64 663 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 OR2A5Q96R48 311 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 DRC3Q9H069 523 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 C14orf105Q9NVL8 296 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 STOX2Q9P2F5 926 aaPredicted RBP18.06■□□□□ 0.48
CLN6-221ENST00000637494 TRPC4Q9UBN4 977 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 C3orf18Q9UK00 162 aa18.06■□□□□ 0.48
CLN6-221ENST00000637494 H7BY64 318 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 GRK3P35626 688 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 AVPR1BP47901 424 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 RPS15AP62244 130 aaKnown RBP18.05■□□□□ 0.48
CLN6-221ENST00000637494 TBPL1P62380 186 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 DSG2Q14126 1118 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 HKDC1Q2TB90 917 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 HP1BP3Q5SSJ5 553 aaPredicted RBP18.05■□□□□ 0.48
CLN6-221ENST00000637494 FAM45BPQ6NSW5 357 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 PAQR3Q6TCH7 311 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 KIRREL2Q6UWL6 708 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 C17orf64Q86WR6 236 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 LRRC56Q8IYG6 542 aaPredicted RBP18.05■□□□□ 0.48
CLN6-221ENST00000637494 FAM45AQ8TCE6 357 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 ALKBH8Q96BT7 664 aaKnown RBP18.05■□□□□ 0.48
CLN6-221ENST00000637494 PRAP1Q96NZ9 151 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 LHPPQ9H008 270 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 MKKSQ9NPJ1 570 aaPredicted RBP18.05■□□□□ 0.48
CLN6-221ENST00000637494 PDE10AQ9Y233 779 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 MED13Q9UHV7 2174 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 UBR5O95071 2799 aaPredicted RBP18.05■□□□□ 0.48
CLN6-221ENST00000637494 PCM1Q15154 2024 aa18.05■□□□□ 0.48
CLN6-221ENST00000637494 PCSK5Q92824 1860 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 PCDH17O14917 1159 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 MED26O95402 600 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 IVDP26440 423 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 ITGA8P53708 1063 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 EMP2P54851 167 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 CDKN2DP55273 166 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 RBM20Q5T481 1227 aaKnown RBP18.04■□□□□ 0.48
CLN6-221ENST00000637494 TEDDM1Q5T9Z0 273 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 HIBCHQ6NVY1 386 aaPredicted RBP18.04■□□□□ 0.48
CLN6-221ENST00000637494 AGTRAPQ6RW13 159 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 PARP9Q8IXQ6 854 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 DTWD1Q8N5C7 304 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 BBOF1Q8ND07 529 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 OR11G2Q8NGC1 345 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 THAP11Q96EK4 314 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 TRIM51Q9BSJ1 452 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 TRIM31Q9BZY9 425 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 EPS8L2Q9H6S3 715 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 CUEDC1Q9NWM3 386 aaPredicted RBP18.04■□□□□ 0.48
CLN6-221ENST00000637494 ZFATQ9P243 1243 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 ADAMTS6Q9UKP5 1117 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 CCDC88CQ9P219 2028 aa18.04■□□□□ 0.48
CLN6-221ENST00000637494 IGLV3-12A0A075B6K2 115 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 EFCAB8A8MWE9 144 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 MASP2O00187 686 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 TTI1O43156 1089 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 ALOX12BO75342 701 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 HPP00738 406 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 HEXBP07686 556 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 UQCRHP07919 91 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 GABRB3P28472 473 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 FAM53BQ14153 422 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 VWA2Q5GFL6 755 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 FHL5Q5TD97 284 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 HECTD2Q5U5R9 776 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 CAPN13Q6MZZ7 669 aaPredicted RBP18.03■□□□□ 0.48
CLN6-221ENST00000637494 PLD3Q8IV08 490 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 IGDCC3Q8IVU1 814 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 TBC1D19Q8N5T2 526 aa18.03■□□□□ 0.48
CLN6-221ENST00000637494 ATL1Q8WXF7 558 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms