RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 OR52A5Q9H2C5 316 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 RHOJQ9H4E5 214 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 COG4Q9H9E3 785 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 CUEDC1Q9NWM3 386 aaPredicted RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 ZDHHC3Q9NYG2 299 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 IL1RAPL1Q9NZN1 696 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 MID2Q9UJV3 735 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ICE1Q9Y2F5 2266 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 IGLV3-16A0A075B6K0 115 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 C9J4A7 227 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 E7EQ34 232 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 BTN3A3O00478 584 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 BTN3A1O00481 513 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 SNNO75324 88 aaPredicted RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 PROCP04070 461 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ST6GAL1P15907 406 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 AGXTP21549 392 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ITGA1P56199 1179 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 NCALDP61601 193 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 OCRLQ01968 901 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 BST1Q10588 318 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ILF2Q12905 390 aaKnown RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 STX3Q13277 289 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 INPP5JQ15735 1006 aaPredicted RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 ZNF658BQ4V348 819 aaPredicted RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 FASTKD1Q53R41 847 aaKnown RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 JMJD6Q6NYC1 403 aaPredicted RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 AMIGO1Q86WK6 493 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 RAB43Q86YS6 212 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 CRLF3Q8IUI8 442 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ZBTB2Q8N680 514 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 FDCSPQ8NFU4 85 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 PPP1R14CQ8TAE6 165 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 CALML6Q8TD86 181 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 SSC4DQ8WTU2 575 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ERP27Q96DN0 273 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 THOC1Q96FV9 657 aaKnown RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 VPS39Q96JC1 886 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 TRAPPC9Q96Q05 1148 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 SMAD5Q99717 465 aaKnown RBP12.16□□□□□ -0.46
CTSD-208ENST00000636843 SIKE1Q9BRV8 207 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 MECRQ9BV79 373 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 MYLK2Q9H1R3 596 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 FAM96AQ9H5X1 160 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 TREX1Q9NSU2 369 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 THAP1Q9NVV9 213 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 EMCNQ9ULC0 261 aa12.16□□□□□ -0.46
CTSD-208ENST00000636843 ESPL1Q14674 2120 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 NOTCH2Q04721 2471 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 TNRC6AQ8NDV7 1962 aaKnown RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 TRBV5-4A0A0C4DH59 114 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 C2orf74A8MZ97 194 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 HNRNPCL1O60812 293 aaKnown RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 APOA4P06727 396 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 GRK2P25098 689 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 ACRV1P26436 265 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 MC4RP32245 332 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 THOC5Q13769 683 aaKnown RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 BOP1Q14137 746 aaKnown RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 NCF4Q15080 339 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 KIAA0408Q6ZU52 694 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 ZC3HC1Q86WB0 502 aaKnown RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 GPR135Q8IZ08 494 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 ADGRF3Q8IZF5 1079 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 OR52E1Q8NGJ3 308 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 RFWD2Q8NHY2 731 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 SREK1Q8WXA9 508 aaKnown RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 TFGQ92734 400 aaPredicted RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 ZNF778Q96MU6 729 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 IP6K3Q96PC2 410 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 C17orf62Q9BQA9 187 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 TUBB6Q9BUF5 446 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 NUDT9Q9BW91 350 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 SLC29A3Q9BZD2 475 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 SLAMF7Q9NQ25 335 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 SAR1AQ9NR31 198 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 GPR83Q9NYM4 423 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 ACTR10Q9NZ32 417 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 PLEKHB1Q9UF11 243 aaPredicted RBP12.15□□□□□ -0.46
CTSD-208ENST00000636843 ZFP69BQ9UJL9 534 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 PADI2Q9Y2J8 665 aa12.15□□□□□ -0.46
CTSD-208ENST00000636843 A0A096LPK6 155 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 A6NL46 340 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 H7C0S8 307 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 ZNF749O43361 778 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 LDB2O43679 373 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 UNC5CO95185 931 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 VAPBO95292 243 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 SERPINE1P05121 402 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 CD63P08962 238 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 COL6A2P12110 1019 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 PDHA2P29803 388 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 RASSF2P50749 326 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 PCLAFQ15004 111 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 PTCHD3Q3KNS1 767 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 ZRANB3Q5FWF4 1079 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 TSTD2Q5T7W7 516 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 FAM69BQ5VUD6 431 aa12.14□□□□□ -0.47
CTSD-208ENST00000636843 ZNF385CQ66K41 422 aaPredicted RBP12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms