RNA–Protein interactions for RNA: ENST00000636610.1

CACNA1A-228, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,011 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-228ENST00000636610 EPN2O95208 641 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 KCNK5O95279 499 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 RPLP2P05387 115 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 RETP07949 1114 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 SERPINA4P29622 427 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 HOXA9P31269 272 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 KDELR2P33947 212 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 NSG1P42857 185 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 NRIP1P48552 1158 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 CLK1P49759 484 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 AP1S1P61966 158 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 MEF2AQ02078 507 aaPredicted RBP13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 ZNF852Q6ZMS4 543 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 CLIP4Q8N3C7 705 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 ZNF347Q96SE7 839 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 RLIMQ9NVW2 624 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 KCTD5Q9NXV2 234 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 SCN3BQ9NY72 215 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 RHCGQ9UBD6 479 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 FAM220BPB1ANY3 271 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 CRATP43155 626 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 PPP3CCP48454 512 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 CRISP3P54108 245 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 ELAVL2Q12926 359 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 MADCAM1Q13477 382 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 VMACQ2NL98 169 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 Q6ZVL8 140 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 SAMD11Q96NU1 681 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 CWH43Q9H720 699 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 TBCCD1Q9NVR7 557 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 B4GALT6Q9UBX8 382 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 TMPRSS11EQ9UL52 423 aa13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 PAIP2BQ9ULR5 123 aaKnown RBP13.59□□□□□ -0.23
CACNA1A-228ENST00000636610 A0A1W2PRU2 124 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 PCDH7O60245 1069 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 DNTTP04053 509 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 SLC10A3P09131 477 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 AMD1P17707 334 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 RRM2P31350 389 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 ABHD18Q0P651 414 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 CDKN3Q16667 212 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 COLEC12Q5KU26 742 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 CALHM3Q86XJ0 350 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 SLC44A2Q8IWA5 706 aaPredicted RBP13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 RNF168Q8IYW5 571 aaPredicted RBP13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 C1orf52Q8N6N3 182 aaKnown RBP13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 DCAF4L2Q8NA75 395 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 NELL1Q92832 810 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 DNASE1L2Q92874 299 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 TRIT1Q9H3H1 467 aaKnown RBP13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 REEP1Q9H902 201 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 TPT1P8Q9HAU6 139 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 HMG20AQ9NP66 347 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 IL1RAPQ9NPH3 570 aa13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 CAB39Q9Y376 341 aaPredicted RBP13.58□□□□□ -0.23
CACNA1A-228ENST00000636610 RGS10O43665 173 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 IGSF6O95976 241 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 BDKRB1P46663 353 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ST13P50502 369 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ACSM2AQ08AH3 577 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ACSM2BQ68CK6 577 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 SHQ1Q6PI26 577 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 MACC1Q6ZN28 852 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ASPSCR1Q9BZE9 553 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 USE1Q9NZ43 259 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 FZD4Q9ULV1 537 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 SAMD4AQ9UPU9 718 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 SH3BP1Q9Y3L3 701 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 CCDC88CQ9P219 2028 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 TRIM43BA6NCK2 446 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 J3KTA2 159 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 KDM1AO60341 852 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 CCNDBP1O95273 360 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ITIH1P19827 911 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 CD9P21926 228 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ETV3P41162 512 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 NKX2-5P52952 324 aaPredicted RBP13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC35A2P78381 396 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 MC1RQ01726 317 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 EPS8Q12929 822 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 GANABQ14697 944 aaKnown RBP13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 PLEKHG6Q3KR16 790 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 SLC22A16Q86VW1 577 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 PTOV1Q86YD1 416 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ANKRD13BQ86YJ7 626 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 P3H2Q8IVL5 708 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 CADM3Q8N126 398 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 NAGSQ8N159 534 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 OR2AP1Q8NGE2 309 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 LGALS12Q96DT0 336 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 ZHX1-C8orf76Q96EF9 292 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 KLHL25Q9H0H3 589 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 TPRKBQ9Y3C4 175 aa13.58□□□□□ -0.24
CACNA1A-228ENST00000636610 GRXCR2A6NFK2 248 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 TRIM64BA6NI03 449 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 TBX1O43435 398 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 RPS3P23396 243 aaKnown RBP eCLIP13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 POU1F1P28069 291 aa13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 GTF2E2P29084 291 aaKnown RBP13.57□□□□□ -0.24
CACNA1A-228ENST00000636610 LIPAP38571 399 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms