RNA–Protein interactions for RNA: ENST00000636549.1

CACNA1A-227, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,792 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-227ENST00000636549 WDR45BQ5MNZ6 344 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PRAMEF14Q5SWL7 426 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PRAMEF13Q5VWM6 474 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 C15orf52Q6ZUT6 534 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 LAPTM4BQ86VI4 370 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 GPALPP1Q8IXQ4 340 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PHTF2Q8N3S3 785 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PIK3C2BO00750 1634 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 GADD45AP24522 165 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 HERV-K104P61576 105 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 GTF2BQ00403 316 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 ZFP69Q49AA0 526 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 EIPR1Q53HC9 387 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 LRRC66Q68CR7 880 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 TTC27Q6P3X3 843 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 DLG3Q92796 817 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 DNAJC5Q9H3Z4 198 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 SFTPBP07988 381 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 PREPP48147 710 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 XKP51811 444 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 KLHDC7BQ96G42 594 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 CCDC59Q9P031 241 aaKnown RBP17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 MAGEL2Q9UJ55 1249 aa17.39■□□□□ 0.37
CACNA1A-227ENST00000636549 CLCN4P51793 760 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 KHDC1LQ5JSQ8 128 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 OR6Q1Q8NGQ2 317 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 NUDT4Q9NZJ9 180 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 A0A1W2PP55 124 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 DPPA5A6NC42 116 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 FGF18O76093 207 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 CD2P06729 351 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 GHRHRQ02643 423 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 MLC1Q15049 377 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 CRB2Q5IJ48 1285 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 APLFQ8IW19 511 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 TLR10Q9BXR5 811 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 HIF1ANQ9NWT6 349 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 ANGPTL1O95841 491 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 OLR1P78380 273 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 IFNL1Q8IU54 200 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 KLHL15Q96M94 604 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 ZNF649Q9BS31 505 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 CLK4Q9HAZ1 481 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 DUSP11O75319 330 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 ADRA1BP35368 520 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 LAPTM4AQ15012 233 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 C6orf132Q5T0Z8 1188 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 LYSMD3Q7Z3D4 306 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 ZDHHC21Q8IVQ6 265 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 SPIN1Q9Y657 262 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 DNMT3AQ9Y6K1 912 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 IRGMA1A4Y4 181 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 HTR3EA5X5Y0 456 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 KAT7O95251 611 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 PIM1P11309 404 aaPredicted RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 PSMA1P25786 263 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 SOX2P48431 317 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 KIF18BQ86Y91 864 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 ZNF781Q8N8C0 355 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 NANSQ9NR45 359 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 ZCCHC3Q9NUD5 404 aaKnown RBP17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 LAMP5Q9UJQ1 280 aa17.38■□□□□ 0.37
CACNA1A-227ENST00000636549 CBFA2T3O75081 653 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 C2P06681 752 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ITGB5P18084 799 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 MATN1P21941 496 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 PPIBP23284 216 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 GDF5P43026 501 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ARRB1P49407 418 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 PLP2Q04941 152 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 FAM110CQ1W6H9 321 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 VSTM1Q6UX27 236 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 OTUB2Q96DC9 234 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ZBED6CLQ96FA7 236 aaPredicted RBP17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 CXCR6O00574 342 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ACVRL1P37023 503 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 DCDC1P59894 354 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 TMEM185BQ9H7F4 350 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 HRASLS2Q9NWW9 162 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 TMEM265A0A087WTH1 108 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ADAP00813 363 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 DLDP09622 509 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 RHOQP17081 205 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 FBLP22087 321 aaKnown RBP17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 DECR1Q16698 335 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 RFKQ969G6 155 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ABCD2Q9UBJ2 740 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 ZNF221Q9UK13 617 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 A0A0A6YYH2 397 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 A6NJ64 397 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 KCNQ1P51787 676 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 SSTP61278 116 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 UGT8Q16880 541 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 GPR139Q6DWJ6 353 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 PLET1Q6UQ28 207 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 PDPRQ8NCN5 879 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 PNPLA2Q96AD5 504 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 RGMAQ96B86 450 aa17.37■□□□□ 0.37
CACNA1A-227ENST00000636549 SLC6A7Q99884 636 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms