RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 ZNF713Q8N859 430 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 MRPL43Q8N983 215 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 OR1J2Q8NGS2 313 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 GOT1L1Q8NHS2 421 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 CFAP61Q8NHU2 1237 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 NCOA7Q8NI08 942 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 KIF18AQ8NI77 898 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 HM13Q8TCT9 377 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 DEPDC1BQ8WUY9 529 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 MRPS27Q92552 414 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 INPP5DQ92835 1189 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM162AQ96A26 154 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 ZNF707Q96C28 371 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 HDAC11Q96DB2 347 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 SIPA1Q96FS4 1042 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 MBOAT7Q96N66 472 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 NECTIN4Q96NY8 510 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 GBP5Q96PP8 586 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 NEK1Q96PY6 1258 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 SPAG5Q96R06 1193 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 LZTS2Q9BRK4 669 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 NAA11Q9BSU3 229 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 SLC25A23Q9BV35 468 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 POLDIP3Q9BY77 421 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 ZMYND12Q9H0C1 365 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 TMEM117Q9H0C3 514 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 FAM49AQ9H0Q0 323 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 PPIL3Q9H2H8 161 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 ST6GALNAC4Q9H4F1 302 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 TLE6Q9H808 572 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 PSTPIP2Q9H939 334 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 GRPEL1Q9HAV7 217 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 VAT1LQ9HCJ6 419 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 MBNL1Q9NR56 388 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 ABCF3Q9NUQ8 709 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 OLAHQ9NV23 265 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 BARHL2Q9NY43 387 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 OR6C3Q9NZP0 311 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 LARSQ9P2J5 1176 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 DDX25Q9UHL0 483 aaKnown RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 DUSP12Q9UNI6 340 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 MAST4O15021 2626 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 EML5Q05BV3 1969 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 OBSL1O75147 1896 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 NUP210Q8TEM1 1887 aaPredicted RBP2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 MYO16Q9Y6X6 1858 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 F5P12259 2224 aa2.41□□□□□ -2.02
SMARCB1-208ENST00000634926 EDDM13A0A1B0GTR0 161 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 EIF4E1BA6NMX2 242 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 KDM4EB2RXH2 506 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MS4A18H0YCH9 400 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 I6L893 689 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TADA2AO75478 443 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 RPS6KA5O75582 802 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 NDUFB8O95169 186 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 VNN2O95498 520 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 BCL10O95999 233 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 VTNP04004 478 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 STAG3L1P0CL83 205 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CALM1P0DP23 149 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CALM2P0DP24 149 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CALM3P0DP25 149 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 G6PDP11413 515 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 VPREB1P12018 145 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 TDGF1P13385 188 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 FDPSP14324 419 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 DARSP14868 501 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ARSBP15848 533 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 EPCAMP16422 314 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 GJA1P17302 382 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ERCC2P18074 760 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 NR2F2P24468 414 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 OAS2P29728 719 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MC5RP33032 325 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 KIF5BP33176 963 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 PIGAP37287 484 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 EIF2S3P41091 472 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MTHFRP42898 656 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MATR3P43243 847 aaKnown RBP eCLIP2.4□□□□□ -2.035e-9■■■■□ 20.1
SMARCB1-208ENST00000634926 TNNT3P45378 269 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CLCN4P51793 760 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 P2RX3P56373 397 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CSNK2A1P68400 391 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 RPL36AP83881 106 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 PRKCEQ02156 737 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 SP4Q02446 784 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 DSC1Q08554 894 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 RALGDSQ12967 914 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MAD2L1Q13257 205 aaPredicted RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 CAMK2DQ13557 499 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MYBPC2Q14324 1141 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 SMC1AQ14683 1233 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 DECR1Q16698 335 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MRGPRG-AS1Q2M3A8 158 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 HYAL4Q2M3T9 481 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 EIF2S3LQ2VIR3 472 aaKnown RBP2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 PRTGQ2VWP7 1150 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 ZNF284Q2VY69 593 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 LETM2Q2VYF4 491 aa2.4□□□□□ -2.03
SMARCB1-208ENST00000634926 MYLK3Q32MK0 819 aa2.4□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms