RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 MKKSQ9NPJ1 570 aaPredicted RBP13.09□□□□□ -0.31
SNX1-214ENST00000625244 CAPN11Q9UMQ6 739 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 CDC14AQ9UNH5 594 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 ALG6Q9Y672 507 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 FAM169AQ9Y6X4 670 aa13.09□□□□□ -0.31
SNX1-214ENST00000625244 ZNF407Q9C0G0 2248 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 C2orf81A6NN90 581 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 GOLGA6L6A8MZA4 724 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 TARM1B6A8C7 271 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 PPP1R12AO14974 1030 aaPredicted RBP13.08□□□□□ -0.32
SNX1-214ENST00000625244 KDM1AO60341 852 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 PRMT3O60678 531 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 PDE9AO76083 593 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 ITGALP20701 1170 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 KDELR1P24390 212 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 ZFP36L2P47974 494 aaKnown RBP13.08□□□□□ -0.32
SNX1-214ENST00000625244 DCAF7P61962 342 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 KLHL30Q0D2K2 578 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 PCBP2Q15366 365 aaKnown RBP eCLIP13.08□□□□□ -0.32
SNX1-214ENST00000625244 ELMO1Q92556 727 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 SYN2Q92777 582 aaPredicted RBP13.08□□□□□ -0.32
SNX1-214ENST00000625244 MMABQ96EY8 250 aaPredicted RBP13.08□□□□□ -0.32
SNX1-214ENST00000625244 VN1R1Q9GZP7 353 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 PLEKHF2Q9H8W4 249 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 AIPL1Q9NZN9 384 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 BZW2Q9Y6E2 419 aaKnown RBP13.08□□□□□ -0.32
SNX1-214ENST00000625244 PRSS21Q9Y6M0 314 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 ARID1AO14497 2285 aa13.08□□□□□ -0.32
SNX1-214ENST00000625244 A0A0G2JNJ9 132 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 SLC5A10A0PJK1 596 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 MYO1FO00160 1098 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 PRPF4O43172 522 aaKnown RBP eCLIP13.07□□□□□ -0.32
SNX1-214ENST00000625244 AGTP01019 485 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 GYPCP04921 128 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 GSTM1P09488 218 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 CD53P19397 219 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 ACRV1P26436 265 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 ZNF75DP51815 510 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 MAT1AQ00266 395 aaKnown RBP13.07□□□□□ -0.32
SNX1-214ENST00000625244 GSTM4Q03013 218 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 WASHC5Q12768 1159 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 GRB7Q14451 532 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 FLYWCH1Q4VC44 716 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 SLC9A4Q6AI14 798 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 ARHGAP11AQ6P4F7 1023 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 RNF44Q7L0R7 432 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 SERPINA9Q86WD7 417 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 CNGA4Q8IV77 575 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 SHISA5Q8N114 240 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 VWA5B2Q8N398 1253 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 POGLUT1Q8NBL1 392 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 ARMC2Q8NEN0 867 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 OR52N2Q8NGI0 321 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 METTL21AQ8WXB1 218 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 MRFAP1L1Q96HT8 127 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 CYTH2Q99418 400 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 SYNPO2LQ9H987 977 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 PLSCR2Q9NRY7 297 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 BEX4Q9NWD9 120 aaPredicted RBP13.07□□□□□ -0.32
SNX1-214ENST00000625244 Q9UFV3 132 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 TRPS1Q9UHF7 1281 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 MPDZO75970 2070 aa13.07□□□□□ -0.32
SNX1-214ENST00000625244 OR2W5A6NFC9 320 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 ANXA5P08758 320 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 GLI4P10075 376 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 ERVK-10P10266 1014 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 PSMB5P28074 263 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 GXYLT1Q4G148 440 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 Q5PR19 223 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 FBXO42Q6P3S6 717 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 C16orf47Q6ZP98 133 aaPredicted RBP13.06□□□□□ -0.32
SNX1-214ENST00000625244 CXorf67Q86X51 503 aaPredicted RBP13.06□□□□□ -0.32
SNX1-214ENST00000625244 SLC5A8Q8N695 610 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 OR2L8Q8NGY9 312 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 M1APQ8TC57 530 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 FAM222BQ8WU58 562 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 MVB12AQ96EY5 273 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 FCRL5Q96RD9 977 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 MIPEPQ99797 713 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 TTYH2Q9BSA4 534 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 CDCP1Q9H5V8 836 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 MMP25Q9NPA2 562 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 PNPLA3Q9NST1 481 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 RUVBL1Q9Y265 456 aaKnown RBP13.06□□□□□ -0.32
SNX1-214ENST00000625244 KLK4Q9Y5K2 254 aa13.06□□□□□ -0.32
SNX1-214ENST00000625244 A0A0A6YYC8 382 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 TRBV5-4A0A0C4DH59 114 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 C5orf60A6NFR6 353 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 AKR1B15C9JRZ8 316 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 NPIPA2E9PIF3 369 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 NPIPA3F8WFD2 350 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 H0YGG7 62 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 I3L1I5 382 aaPredicted RBP13.05□□□□□ -0.32
SNX1-214ENST00000625244 APOL1O14791 398 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 WIPF1O43516 503 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 FOXS1O43638 330 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 CRLF1O75462 422 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 SERPING1P05155 500 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 CYP1A2P05177 515 aa13.05□□□□□ -0.32
SNX1-214ENST00000625244 SKILP12757 684 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms