RNA–Protein interactions for RNA: ENST00000622668.4

HDAC9-229, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-229ENST00000622668 TRABD2AQ86V40 505 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 CCDC74AQ96AQ1 378 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 GATA5Q9BWX5 397 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 EPS8L2Q9H6S3 715 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 WDR55Q9H6Y2 383 aaPredicted RBP8.8□□□□□ -1
HDAC9-229ENST00000622668 STARD5Q9NSY2 213 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 POT1Q9NUX5 634 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 ADPRHL2Q9NX46 363 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 CROTQ9UKG9 612 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 SRPK3Q9UPE1 567 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 PLCL2Q9UPR0 1127 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 MAP4K5Q9Y4K4 846 aa8.8□□□□□ -1
HDAC9-229ENST00000622668 DICER1Q9UPY3 1922 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 PATE3B3GLJ2 98 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 C9JVG2 144 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 KERAO60938 352 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 SCRG1O75711 98 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 S1PR4O95977 384 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 C1SP09871 688 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 HOXC12P31275 282 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 CCR5P51681 352 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 PGGT1BP53609 377 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 ITGA1P56199 1179 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 RPS13P62277 151 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 OLR1P78380 273 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 GABPB1Q06547 395 aaPredicted RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 GRIK2Q13002 908 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 SP140Q13342 867 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 C14orf28Q4W4Y0 310 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 Q6ZNB5 142 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 TMEM26Q6ZUK4 368 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 LRRC70Q7Z2Q7 622 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 EIF1ADQ8N9N8 165 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 SLC37A2Q8TED4 501 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 DOK4Q8TEW6 326 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 PATE1Q8WXA2 126 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 TM9SF4Q92544 642 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 KCNN1Q92952 543 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 ZBED6CLQ96FA7 236 aaPredicted RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 NSMCE2Q96MF7 247 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 KCTD14Q9BQ13 255 aaPredicted RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 YIPF4Q9BSR8 244 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 IER2Q9BTL4 223 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 SPATA5L1Q9BVQ7 753 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 EPHX3Q9H6B9 360 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 ARMCX1Q9P291 453 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 RAPGEFL1Q9UHV5 662 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 CFL2Q9Y281 166 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 PSAT1Q9Y617 370 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 GPR89AB7ZAQ6 455 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 KLK10O43240 276 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 GPR89BP0CG08 455 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 BCKDHBP21953 392 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 HRH2P25021 359 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 ARG2P78540 354 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 FLOT2Q14254 428 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 NNATQ16517 81 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 HKDC1Q2TB90 917 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 KDELC1Q6UW63 502 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 CAND1Q86VP6 1230 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 AENQ8WTP8 325 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 NT5C3BQ969T7 300 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 MYEOVQ96EZ4 313 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 TIMM29Q9BSF4 260 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 KCND1Q9NSA2 647 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 PNPOQ9NVS9 261 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 C1orf109Q9NX04 203 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 IMPAD1Q9NX62 359 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 ANGPTL2Q9UKU9 493 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 CNOT6Q9ULM6 557 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 KIAA1217Q5T5P2 1943 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 IGLV3-10A0A075B6K4 115 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 YY2O15391 372 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 SERPINB7O75635 380 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 TOP3BO95985 862 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 JUNP05412 331 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 UROSP10746 265 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 CHRNB1P11230 501 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 FECHP22830 423 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 PDHA2P29803 388 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 GSTM4Q03013 218 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 TRIP6Q15654 476 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 WASHC2DQ5SRD0 308 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 C19orf60Q96EN9 201 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 SMAD5Q99717 465 aaKnown RBP8.79□□□□□ -1
HDAC9-229ENST00000622668 KRT84Q9NSB2 600 aa8.79□□□□□ -1
HDAC9-229ENST00000622668 PDPK1O15530 556 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 PLIN3O60664 434 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 RETP07949 1114 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 MTHFD1P11586 935 aaKnown RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 ZNF37AP17032 561 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 ABHD18Q0P651 414 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 KLF1Q13351 362 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 UNC5DQ6UXZ4 953 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 RNF168Q8IYW5 571 aaPredicted RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 RASGEF1AQ8N9B8 481 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 DAZLQ92904 295 aaKnown RBP8.78□□□□□ -1
HDAC9-229ENST00000622668 OLFM3Q96PB7 478 aa8.78□□□□□ -1
HDAC9-229ENST00000622668 PLEKHM1Q9Y4G2 1056 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms