RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 PNLIPRP1P54315 467 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PRMT2P55345 433 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CCL23P55773 120 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 POLR2LP62875 67 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CSNK2BP67870 215 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SEMG2Q02383 582 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 IRF8Q02556 426 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 EMX1Q04741 257 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PIGFQ07326 219 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 LRRC74AQ0VAA2 488 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PPP1R8Q12972 351 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 GTF2H3Q13889 308 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 E2F2Q14209 437 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 DMC1Q14565 340 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 MAD2L1BPQ15013 274 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 NPTX1Q15818 432 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SLC44A4Q53GD3 710 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 LDLRAP1Q5SW96 308 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SPOUT1Q5T280 376 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SYT6Q5T7P8 510 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ANXA8L1Q5VT79 327 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 LAIR1Q6GTX8 287 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 C16orf87Q6PH81 154 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 GDPD4Q6W3E5 623 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 DPY19L3Q6ZPD9 716 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 B3GNT8Q7Z7M8 397 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 TSPYL5Q86VY4 417 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 THOC6Q86W42 341 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 RBM12BQ8IXT5 1001 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 HS6ST3Q8IZP7 471 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CENPSQ8N2Z9 138 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SVOPQ8N4V2 548 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 TTC16Q8NEE8 873 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 OR7A2PQ8NGA2 310 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 IPCEF1Q8WWN9 437 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ATL1Q8WXF7 558 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 RORBQ92753 470 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SH3YL1Q96HL8 342 aaPredicted RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 FAM210AQ96ND0 272 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PANX1Q96RD7 426 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SIGLEC11Q96RL6 698 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 APOL4Q9BPW4 351 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ASPSCR1Q9BZE9 553 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 RIBC2Q9H4K1 309 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 RC3H2Q9HBD1 1191 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 NECTIN3Q9NQS3 549 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 SIRT5Q9NXA8 310 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 VPS29Q9UBQ0 182 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 WARS2Q9UGM6 360 aaKnown RBP9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 FBXO10Q9UK96 956 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CORO2BQ9UQ03 480 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 ERGIC3Q9Y282 383 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 COQ6Q9Y2Z9 468 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 PCDHGA10Q9Y5H3 936 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CORINQ9Y5Q5 1042 aa9.31□□□□□ -0.92
IGHV3-54-201ENST00000622166 CLDN25C9JDP6 229 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 PTGES3LE9PB15 166 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 SCAMP2O15127 329 aaKnown RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 TEX28O15482 410 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 C9P02748 559 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 MT-ND2P03891 347 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 CKMP06732 381 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 COX7A2P14406 83 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 HLA-FP30511 346 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 MAPK9P45984 424 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 MASP1P48740 699 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 CD97P48960 835 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 PXNP49023 591 aaPredicted RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 RAE1P78406 368 aaKnown RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 VLDLRP98155 873 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 OCA2Q04671 838 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 FADDQ13158 208 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 DOC2AQ14183 400 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 NR1D2Q14995 579 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 ASTLQ6HA08 431 aaPredicted RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 NIPAL1Q6NVV3 410 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 BRAT1Q6PJG6 821 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 SERPINA13PQ6UXR4 307 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF621Q6ZSS3 439 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 PRSS48Q7RTY5 328 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 ANKRD33Q7Z3H0 272 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 DEFB128Q7Z7B8 93 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 KIAA0907Q7Z7F0 614 aaPredicted RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 IGFN1Q86VF2 1251 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 HORMAD1Q86X24 394 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 CMTM8Q8IZV2 173 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 TRAM1L1Q8N609 369 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 ZNF557Q8N988 423 aaPredicted RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 TTC29Q8NA56 475 aaPredicted RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 OR56A3Q8NH54 315 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 CNIH3Q8TBE1 160 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 CHTF18Q8WVB6 975 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 ASZ1Q8WWH4 475 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 S100ZQ8WXG8 99 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 AUTS2Q8WXX7 1259 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 ELMO1Q92556 727 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 CLP1Q92989 425 aaKnown RBP9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 GLMNQ92990 594 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 PYCR2Q96C36 320 aa9.3□□□□□ -0.92
IGHV3-54-201ENST00000622166 COQ8BQ96D53 544 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms