RNA–Protein interactions for RNA: ENST00000621829.4

CLTC-215, Transcript of clathrin heavy chain, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CLTC, Length 8,587 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTC-215ENST00000621829 MIOSQ9NXC5 875 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 ZNF608Q9ULD9 1512 aaPredicted RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 UBFD1O14562 309 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 NCS1P62166 190 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 GPR157Q5UAW9 335 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 CES5AQ6NT32 575 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 TMEM199Q8N511 208 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 NDNFQ8TB73 568 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 THEM6Q8WUY1 208 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 NDRG1Q92597 394 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 SULT4A1Q9BR01 284 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 FUNDC2Q9BWH2 189 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 RIOX1Q9H6W3 641 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 FOLH1BQ9HBA9 442 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 THUMPD1Q9NXG2 353 aaKnown RBP11.32□□□□□ -0.6
CLTC-215ENST00000621829 ABCC3O15438 1527 aa11.32□□□□□ -0.6
CLTC-215ENST00000621829 LCHNA4D1U4 455 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 RENP00797 406 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 C6orf89Q6UWU4 347 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 OR4Q3Q8NH05 313 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 PRRG4Q9BZD6 226 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 NUDT4Q9NZJ9 180 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 PPP5CP53041 499 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 CREMQ03060 361 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ATAT1Q5SQI0 421 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 IRAK1BP1Q5VVH5 260 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 HGSNATQ68CP4 663 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 C17orf64Q86WR6 236 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 CXorf40BQ96DE9 158 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ITPKCQ96DU7 683 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 MTMR9Q96QG7 549 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ZNF282Q9UDV7 671 aaPredicted RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 CRB1P82279 1406 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 POM121CA8CG34 1229 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 KLRK1P26718 216 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 PRR5P85299 388 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ST3GAL4Q11206 333 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 POU4F2Q12837 409 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 CBX2Q14781 532 aaPredicted RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 TMEM69Q5SWH9 247 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 C1orf94Q6P1W5 598 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ATG5Q9H1Y0 275 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 AGO1Q9UL18 857 aaKnown RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 LRRIQ1Q96JM4 1722 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ITGA5P08648 1049 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 HOXD10P28358 340 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 RPS14P62263 151 aaKnown RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 CDK18Q07002 472 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 PCBP2Q15366 365 aaKnown RBP eCLIP11.31□□□□□ -0.64e-7■■■■□ 20.2
CLTC-215ENST00000621829 TREML1Q86YW5 311 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 FAM217AQ8IXS0 508 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 OR10T2Q8NGX3 314 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 SMARCD2Q92925 531 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 RRNAD1Q96FB5 475 aaKnown RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 SLC35A5Q9BS91 424 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 B3GNT5Q9BYG0 378 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 RHOP08100 348 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 RFX5P48382 616 aaPredicted RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 LSSP48449 732 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 ITIH5Q86UX2 942 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 PLD5Q8N7P1 536 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 SHC3Q92529 594 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 DNAJC5BQ9UF47 199 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 DNMT3AQ9Y6K1 912 aaPredicted RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 ALDH2P05091 517 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 PRKCGP05129 697 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 URODP06132 367 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 RAB6AP20340 208 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 TGM4P49221 684 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 GALNT1Q10472 559 aaPredicted RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 MTERF1Q99551 399 aaKnown RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 PDGFDQ9GZP0 370 aaPredicted RBP11.31□□□□□ -0.6
CLTC-215ENST00000621829 ABCG4Q9H172 646 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 REEP4Q9H6H4 257 aa11.31□□□□□ -0.6
CLTC-215ENST00000621829 FAM237AA0A1B0GTK4 181 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 YDJCA8MPS7 323 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 PCDH17O14917 1159 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 ICMTO60725 284 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 CD53P19397 219 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 ALAS2P22557 587 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 GSK3BP49841 420 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 PRKXP51817 358 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 NFATC3Q12968 1075 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 KANK2Q63ZY3 851 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 ZDHHC24Q6UX98 284 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 HFE2Q6ZVN8 426 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 IGFN1Q86VF2 1251 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 FAM109AQ8N4B1 249 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 LRRC57Q8N9N7 239 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 OR9I1Q8NGQ6 314 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 OR2AJ1Q8NGZ0 328 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 ZBTB20Q9HC78 741 aaPredicted RBP11.3□□□□□ -0.6
CLTC-215ENST00000621829 IL17RBQ9NRM6 502 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 CNOT11Q9UKZ1 510 aaKnown RBP11.3□□□□□ -0.6
CLTC-215ENST00000621829 CLIC1O00299 241 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 TLR5O60602 858 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 ALPPP05187 535 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 AQP2P41181 271 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 NTRK2Q16620 822 aa11.3□□□□□ -0.6
CLTC-215ENST00000621829 TEX44Q53QW1 395 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms